Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0134

Experiment: KB with Avocatin A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin A 10 mM
141,071	+		Psyr_0133	0.80	-0.1
141,190	+				+0.9
141,190	+				+1.1
141,191	-				-0.8
141,191	-				-0.8
141,191	-				-0.3
141,191	-				+0.7
141,191	-				+1.0
141,191	-				+0.1
141,191	-				-0.0
141,191	-				+0.1
141,233	-				+0.8
141,233	-				-1.1
141,233	-				+0.3
141,233	-				+0.8
141,233	-				-1.1
141,561	-				-0.1
141,561	-				+0.7
141,813	+				-0.3
141,813	+				-0.3
141,813	+				+0.3
141,813	+				+0.8
141,814	-				-0.5
141,814	-				-1.1
141,814	-				+0.4
141,814	-				+1.6
141,826	+				-0.7
141,881	-				-0.9
141,948	+				-0.6
141,949	-				+0.6
141,952	+				+0.8
141,952	+				-0.9
141,953	-				+0.0
141,980	+				+0.0
141,981	-				+0.6
141,981	-				+1.0
142,033	-				-0.9
142,033	-				+0.8
142,067	+				-0.0
142,067	+				+0.2
142,076	+				+0.1
142,077	-				+0.6
142,077	-				-1.4
142,689	+		Psyr_0134	0.57	-2.4
142,690	-		Psyr_0134	0.57	-0.3
142,700	+		Psyr_0134	0.58	-0.9
142,700	+		Psyr_0134	0.58	+0.8
142,700	+		Psyr_0134	0.58	+0.6
142,700	+		Psyr_0134	0.58	-2.4
142,700	+		Psyr_0134	0.58	-1.1
142,700	+		Psyr_0134	0.58	+1.4
142,700	+		Psyr_0134	0.58	-0.9
142,701	-		Psyr_0134	0.58	-1.6
142,701	-		Psyr_0134	0.58	-2.2
142,701	-		Psyr_0134	0.58	-1.3
142,701	-		Psyr_0134	0.58	-1.1
143,201	+				-1.1
143,202	-				+0.1
143,215	+				-0.9
143,215	+				+0.2
143,216	-				+1.5
143,340	-				-0.6
143,340	-				-1.1
143,403	-				-0.0
143,437	+				-0.2
143,437	+				-1.3
143,438	-				+1.0
143,532	+				+1.0
143,532	+				-0.4
143,532	+				+1.1
143,532	+				-0.2
143,532	+				+0.1
143,533	-				+0.3
143,533	-				+3.0
143,533	-				-1.2
143,533	-				-0.0
143,533	-				-1.0
143,533	-				-1.7
143,655	-				-0.7
143,681	+				-0.8
143,682	-				+0.4
143,682	-				-1.3
143,682	-				-0.9
143,753	+				-0.6
143,754	-				+0.9
143,754	-				-0.0
143,754	-				+1.0
143,754	-				+0.7
143,754	-				+0.6
143,775	+				+1.0
143,791	+				-0.7
143,791	+				-0.3
143,905	+				-1.8
143,906	-				+1.1
143,906	-				-0.4
144,055	+				-1.2
144,109	-				-0.9
144,109	-				-0.2
144,175	+				+0.6
144,175	+				-0.4
144,175	+				+0.6
144,175	+				-0.2
144,175	+				+0.4
144,175	+				-0.2
144,176	-				-0.3
144,176	-				-0.7
144,176	-				-1.6
144,176	-				-3.2
144,176	-				-0.0
144,176	-				-1.0
144,176	-				-0.7