Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0013

Experiment: KB with Avocatin A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin A 10 mM
14,956	-				+0.8
14,956	-				-1.6
14,994	+				+0.9
15,031	+				-1.0
15,031	+				+1.2
15,031	+				+1.1
15,032	-				+1.6
15,032	-				-0.7
15,032	-				-0.7
15,032	-				-0.1
15,032	-				+2.0
15,032	-				+0.0
15,032	-				+3.0
15,032	-				-1.1
15,032	-				-1.0
15,040	+				-0.2
15,040	+				+0.2
15,040	+				+1.3
15,040	+				-0.8
15,041	-				-0.4
15,041	-				+0.3
15,170	+		Psyr_0013	0.32	-0.4
15,171	-		Psyr_0013	0.32	-1.5
15,171	-		Psyr_0013	0.32	+0.6
15,171	-		Psyr_0013	0.32	-0.3
15,475	+		Psyr_0013	0.87	+1.2
15,475	+		Psyr_0013	0.87	+0.4
15,475	+		Psyr_0013	0.87	-0.4
15,475	+		Psyr_0013	0.87	+1.4
15,475	+		Psyr_0013	0.87	+1.0
15,475	+		Psyr_0013	0.87	-0.1
15,475	+		Psyr_0013	0.87	+0.9
15,476	-		Psyr_0013	0.87	+1.1
15,476	-		Psyr_0013	0.87	-0.1
15,591	-				+0.4
15,975	+		Psyr_0014	0.44	-0.0
15,975	+		Psyr_0014	0.44	+2.0
16,302	-		Psyr_0014	0.81	+2.0
16,302	-		Psyr_0014	0.81	+0.4
16,302	-		Psyr_0014	0.81	+2.0
16,335	+		Psyr_0014	0.84	+2.0
16,335	-		Psyr_0014	0.84	+2.0
16,336	-		Psyr_0014	0.85	-0.3
16,336	-		Psyr_0014	0.85	+2.0
16,336	-		Psyr_0014	0.85	-0.0
16,336	-		Psyr_0014	0.85	+1.0
16,336	-		Psyr_0014	0.85	+1.0
16,336	-		Psyr_0014	0.85	+0.4
16,389	+				+2.0
16,389	+				-0.3
16,413	+				+0.4
16,413	+				+2.0
16,413	+				-0.6
16,413	+				-0.0
16,414	-				+2.0
16,414	-				+2.0
16,467	+				+0.4
16,467	+				-0.0
16,470	+				+2.1
16,471	-				-0.7
16,471	-				+0.0
16,471	-				+1.1