Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2037

Experiment: Biofilm in WT Conditioned Media in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in WT Conditioned Media in Test Tubes with Spin rep 1
2,105,520	+				-0.7
2,105,523	-				+1.6
2,105,533	-				-0.9
2,105,541	+				-0.2
2,105,552	-				-0.6
2,105,564	-				-0.1
2,105,576	-				+1.0
2,105,595	-				+0.4
2,105,631	-		Synpcc7942_2036	0.11	-0.4
2,105,643	-		Synpcc7942_2036	0.12	-1.3
2,105,710	-		Synpcc7942_2036	0.19	+3.6
2,105,803	+		Synpcc7942_2036	0.28	-0.7
2,105,834	+		Synpcc7942_2036	0.31	-2.2
2,105,842	-		Synpcc7942_2036	0.32	-0.8
2,105,842	-		Synpcc7942_2036	0.32	+2.0
2,105,852	-		Synpcc7942_2036	0.33	-1.4
2,105,867	-		Synpcc7942_2036	0.34	-0.2
2,105,890	+		Synpcc7942_2036	0.37	-1.1
2,105,898	-		Synpcc7942_2036	0.37	+0.4
2,105,898	-		Synpcc7942_2036	0.37	+1.1
2,106,023	+		Synpcc7942_2036	0.50	-1.7
2,106,023	+		Synpcc7942_2036	0.50	-0.9
2,106,025	-		Synpcc7942_2036	0.50	+0.2
2,106,032	+		Synpcc7942_2036	0.51	+1.3
2,106,040	-		Synpcc7942_2036	0.52	+1.8
2,106,058	+		Synpcc7942_2036	0.53	-1.5
2,106,060	+		Synpcc7942_2036	0.54	-0.6
2,106,092	-		Synpcc7942_2036	0.57	-2.4
2,106,097	-		Synpcc7942_2036	0.57	-2.4
2,106,176	+		Synpcc7942_2036	0.65	+0.8
2,106,190	-		Synpcc7942_2036	0.66	-2.0
2,106,197	+		Synpcc7942_2036	0.67	+1.0
2,106,205	-		Synpcc7942_2036	0.68	-0.0
2,106,256	-		Synpcc7942_2036	0.73	-0.0
2,106,309	+		Synpcc7942_2036	0.78	+2.3
2,106,322	-		Synpcc7942_2036	0.80	-1.0
2,106,326	+		Synpcc7942_2036	0.80	-1.1
2,106,327	+		Synpcc7942_2036	0.80	-2.2
2,106,327	+		Synpcc7942_2036	0.80	-1.1
2,106,327	+		Synpcc7942_2036	0.80	-2.3
2,106,327	+		Synpcc7942_2036	0.80	+1.7
2,106,327	+		Synpcc7942_2036	0.80	-0.4
2,106,327	+		Synpcc7942_2036	0.80	-0.5
2,106,327	+		Synpcc7942_2036	0.80	-0.1
2,106,327	+		Synpcc7942_2036	0.80	+0.1
2,106,332	+		Synpcc7942_2036	0.81	-0.0
2,106,334	-		Synpcc7942_2036	0.81	-2.1
2,106,335	-		Synpcc7942_2036	0.81	+1.0
2,106,335	-		Synpcc7942_2036	0.81	+0.3
2,106,335	-		Synpcc7942_2036	0.81	-1.0
2,106,339	+		Synpcc7942_2036	0.81	+1.0
2,106,344	+		Synpcc7942_2036	0.82	-1.1
2,106,344	+		Synpcc7942_2036	0.82	+1.6
2,106,344	+		Synpcc7942_2036	0.82	+2.0
2,106,354	+		Synpcc7942_2036	0.83	+1.4
2,106,399	+		Synpcc7942_2036	0.87	-0.7
2,106,407	-		Synpcc7942_2036	0.88	-0.5
2,106,429	-				-0.6
2,106,453	+				+1.0
2,106,505	+				-0.6
2,106,529	-				+0.6
2,106,534	+				-0.4
2,106,544	+				+0.3
2,106,544	+				-0.5
2,106,544	+				+1.0
2,106,546	+				-1.0
2,106,552	-				-0.4
2,106,554	+				-0.4
2,106,556	-				+2.0
2,106,559	+				-1.9
2,106,564	+				-0.7
2,106,564	+				-1.4
2,106,572	+				-1.7
2,106,600	+		Synpcc7942_2037	0.13	-1.0
2,106,609	+		Synpcc7942_2037	0.14	-1.1
2,106,622	-		Synpcc7942_2037	0.16	-0.2
2,106,622	-		Synpcc7942_2037	0.16	-1.4
2,106,625	+		Synpcc7942_2037	0.16	-1.2
2,106,625	+		Synpcc7942_2037	0.16	+2.6
2,106,658	-		Synpcc7942_2037	0.22	-1.6
2,106,658	-		Synpcc7942_2037	0.22	+4.0
2,106,744	-		Synpcc7942_2037	0.35	-0.2
2,106,749	+		Synpcc7942_2037	0.36	+0.6
2,106,749	+		Synpcc7942_2037	0.36	-2.0
2,106,749	+		Synpcc7942_2037	0.36	+1.0
2,106,757	-		Synpcc7942_2037	0.37	-0.1
2,106,811	+		Synpcc7942_2037	0.45	-0.1
2,106,818	+		Synpcc7942_2037	0.46	-0.9
2,106,818	+		Synpcc7942_2037	0.46	+0.2
2,106,818	+		Synpcc7942_2037	0.46	+0.6
2,106,833	+		Synpcc7942_2037	0.49	-0.0
2,106,858	+		Synpcc7942_2037	0.53	-1.2
2,106,882	-		Synpcc7942_2037	0.56	+1.6
2,106,885	+		Synpcc7942_2037	0.57	-0.4
2,106,893	-		Synpcc7942_2037	0.58	-0.6
2,106,922	+		Synpcc7942_2037	0.62	-1.3
2,107,095	+		Synpcc7942_2037	0.89	-1.2
2,107,115	+				+2.4
2,107,116	-				-2.1
2,107,123	-				-0.8
2,107,171	+				+0.2
2,107,224	+				+1.1
2,107,224	+				-0.5
2,107,232	-				+0.2
2,107,239	-				-0.0
2,107,270	+				-2.2
2,107,298	+				-0.9
2,107,298	+				-0.8
2,107,301	-				-2.5
2,107,301	-				-0.6
2,107,301	-				-0.7
2,107,301	-				-0.2
2,107,303	+				+1.0
2,107,303	+				+1.0
2,107,324	-				+1.0
2,107,329	-				+0.0
2,107,329	-				-1.6
2,107,364	+				+3.3
2,107,372	-				+2.3
2,107,682	-		Synpcc7942_2038	0.45	-0.0
2,107,687	-		Synpcc7942_2038	0.46	-0.6
2,107,708	+		Synpcc7942_2038	0.49	+0.5
2,107,805	+		Synpcc7942_2038	0.63	-2.4
2,107,837	-		Synpcc7942_2038	0.68	-0.0
2,107,874	+		Synpcc7942_2038	0.73	-0.6
2,108,056	-				-0.7
2,108,107	+				-0.3
2,108,125	+				-1.3