Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1796

Experiment: Biofilm in WT Conditioned Media in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in WT Conditioned Media in Test Tubes with Spin rep 1
1,865,474	+		Synpcc7942_1794	0.60	+0.9
1,865,534	+		Synpcc7942_1794	0.65	-1.2
1,865,549	-		Synpcc7942_1794	0.66	-0.6
1,865,551	+		Synpcc7942_1794	0.66	-0.9
1,865,552	+		Synpcc7942_1794	0.66	+0.1
1,865,552	-		Synpcc7942_1794	0.66	+0.9
1,865,570	-		Synpcc7942_1794	0.68	-1.9
1,865,599	+		Synpcc7942_1794	0.70	+0.9
1,865,640	-		Synpcc7942_1794	0.74	-0.1
1,865,656	+		Synpcc7942_1794	0.75	-0.1
1,865,690	+		Synpcc7942_1794	0.78	-0.4
1,865,691	-		Synpcc7942_1794	0.78	-2.4
1,865,695	+		Synpcc7942_1794	0.79	+0.9
1,865,727	-		Synpcc7942_1794	0.81	+0.6
1,865,739	-		Synpcc7942_1794	0.82	+0.9
1,865,745	-		Synpcc7942_1794	0.83	+0.9
1,865,745	-		Synpcc7942_1794	0.83	+0.9
1,865,748	-		Synpcc7942_1794	0.83	+0.9
1,865,753	-		Synpcc7942_1794	0.84	+0.9
1,865,783	+		Synpcc7942_1794	0.86	+0.9
1,865,822	-		Synpcc7942_1794	0.89	+0.9
1,865,833	-				+0.9
1,865,878	+				+0.9
1,865,887	-				+0.9
1,865,892	-				+0.9
1,865,892	-				-0.6
1,865,909	-				+0.5
1,865,926	+				+2.9
1,865,929	-				-3.1
1,865,931	-				-1.4
1,865,947	+				-0.6
1,865,962	+				-0.2
1,865,962	-				-0.7
1,865,967	+				-1.1
1,865,967	+				-1.3
1,865,970	-				-0.7
1,865,975	-				-0.3
1,865,977	+				-0.7
1,865,985	-				-0.5
1,865,986	+				-1.4
1,866,418	+				-0.3
1,866,449	+				-0.1
1,866,449	+				+0.4
1,866,452	-				+1.9
1,866,481	+				-0.1
1,866,481	+				-1.8
1,866,487	-		Synpcc7942_1796	0.11	-2.6
1,866,495	-		Synpcc7942_1796	0.13	-3.1
1,866,512	+		Synpcc7942_1796	0.19	+1.3
1,866,512	+		Synpcc7942_1796	0.19	-1.3
1,866,512	+		Synpcc7942_1796	0.19	-0.6
1,866,586	+		Synpcc7942_1796	0.44	-0.9
1,866,586	+		Synpcc7942_1796	0.44	-0.6
1,866,594	+		Synpcc7942_1796	0.47	-0.7
1,866,594	-		Synpcc7942_1796	0.47	-1.4
1,866,670	-		Synpcc7942_1796	0.73	-0.4
1,866,672	+		Synpcc7942_1796	0.73	-1.8
1,866,672	+		Synpcc7942_1796	0.73	+2.0
1,866,680	-		Synpcc7942_1796	0.76	-1.1
1,866,723	+				+1.9
1,866,741	+				-0.8
1,866,741	+				-0.5
1,866,746	+				-0.0
1,866,746	+				-1.8
1,866,746	+				-1.0
1,866,751	+				-0.1
1,866,751	+				+0.3
1,866,753	-				+0.9
1,866,754	-				-0.8
1,866,754	-				-0.6
1,866,786	+				-0.9
1,866,794	-				+1.5
1,866,794	-				-1.3
1,866,794	-				+1.5
1,866,808	+				+1.9
1,866,811	-				+0.1
1,866,813	+				-1.3
1,866,816	-				-2.9
1,866,816	-				-1.2
1,866,816	-				-1.6
1,866,821	-				+0.9
1,866,821	-				-2.5
1,866,822	+				+0.7
1,866,869	+				+0.4
1,866,869	+				-1.9
1,866,870	+				-0.4
1,866,877	-				+0.4
1,866,877	-				-0.0
1,866,877	-				+1.4
1,866,879	+				+1.8
1,866,879	+				+2.4
1,866,879	+				-1.4
1,866,879	+				-0.9
1,866,880	+				+1.7
1,866,880	+				-0.7
1,866,887	-				-0.2
1,866,887	-				+1.4
1,866,887	-				-0.1
1,866,887	-				-1.3
1,866,925	+		Synpcc7942_1797	0.10	+0.9
1,866,943	+		Synpcc7942_1797	0.14	+0.9
1,867,006	+		Synpcc7942_1797	0.26	+1.8
1,867,006	+		Synpcc7942_1797	0.26	-1.1
1,867,060	-		Synpcc7942_1797	0.37	-0.9
1,867,078	-		Synpcc7942_1797	0.41	-1.1
1,867,093	+				+0.2
1,867,101	-		Synpcc7942_1797	0.45	+0.7
1,867,101	-		Synpcc7942_1797	0.45	-0.7
1,867,105	+		Synpcc7942_1797	0.46	-0.4
1,867,105	+		Synpcc7942_1797	0.46	-0.6
1,867,105	+		Synpcc7942_1797	0.46	-1.9
1,867,113	-		Synpcc7942_1797	0.48	-0.1
1,867,154	+		Synpcc7942_1797	0.56	+0.1
1,867,154	+		Synpcc7942_1797	0.56	-0.3
1,867,162	-		Synpcc7942_1797	0.57	-1.6
1,867,162	-		Synpcc7942_1797	0.57	-0.9
1,867,162	-		Synpcc7942_1797	0.57	+0.4
1,867,164	+		Synpcc7942_1797	0.58	-1.7
1,867,172	-		Synpcc7942_1797	0.59	-1.4
1,867,172	-		Synpcc7942_1797	0.59	+0.2
1,867,181	+		Synpcc7942_1797	0.61	+0.2
1,867,194	+		Synpcc7942_1797	0.64	+0.9
1,867,196	+		Synpcc7942_1797	0.64	-0.2
1,867,229	+		Synpcc7942_1797	0.71	+1.2
1,867,229	+		Synpcc7942_1797	0.71	+1.1
1,867,237	+		Synpcc7942_1797	0.72	-1.0
1,867,237	+		Synpcc7942_1797	0.72	-1.1
1,867,239	+		Synpcc7942_1797	0.73	-0.4
1,867,247	+		Synpcc7942_1797	0.74	+0.1
1,867,263	+		Synpcc7942_1797	0.77	-1.3
1,867,271	-		Synpcc7942_1797	0.79	-2.2
1,867,271	-		Synpcc7942_1797	0.79	-1.4
1,867,271	-		Synpcc7942_1797	0.79	-3.4
1,867,271	-		Synpcc7942_1797	0.79	+0.2
1,867,278	-		Synpcc7942_1797	0.80	-2.3
1,867,296	+		Synpcc7942_1797	0.84	-1.1
1,867,298	-		Synpcc7942_1797	0.84	+0.9
1,867,311	+		Synpcc7942_1797	0.87	+0.2
1,867,312	+		Synpcc7942_1797	0.87	-2.2
1,867,321	-		Synpcc7942_1797	0.89	-0.6
1,867,331	-				-2.9
1,867,337	+				+1.9
1,867,347	+				+1.2
1,867,347	+				+0.2
1,867,347	+				-0.4
1,867,355	-				-0.3
1,867,365	+				+0.9
1,867,373	-				-0.5
1,867,408	+				+0.3
1,867,418	+				-0.4
1,867,426	-				+4.3
1,867,468	+				+0.8