Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1196

Experiment: Biofilm in WT Conditioned Media in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in WT Conditioned Media in Test Tubes with Spin rep 1
1,223,489	+				-1.4
1,223,489	+				-1.0
1,223,489	+				+3.6
1,223,490	+				+1.9
1,223,490	+				+0.5
1,223,492	-				+1.0
1,223,497	-				-1.0
1,223,500	+				+0.3
1,223,509	+				+0.2
1,223,538	+				-0.2
1,223,552	-				+0.0
1,223,584	+				+0.0
1,223,599	-				-0.7
1,223,608	-				+0.7
1,223,646	-				+1.5
1,223,679	-				+2.0
1,223,713	-				-1.1
1,223,718	+				+0.0
1,223,728	+				-1.0
1,223,736	-				-1.3
1,223,736	-				-0.7
1,223,737	+				+0.0
1,223,742	+				-0.3
1,223,742	+				-0.1
1,223,742	+				-0.6
1,223,750	-				-0.5
1,223,773	+		Synpcc7942_1195	0.10	-0.5
1,223,775	-		Synpcc7942_1195	0.11	+1.0
1,223,775	-		Synpcc7942_1195	0.11	+1.8
1,223,807	-		Synpcc7942_1195	0.17	-1.3
1,223,820	-		Synpcc7942_1195	0.20	-0.6
1,223,837	-		Synpcc7942_1195	0.23	+2.4
1,223,850	-				-0.8
1,223,855	-		Synpcc7942_1195	0.27	+1.8
1,223,863	-		Synpcc7942_1195	0.28	-0.4
1,223,865	+		Synpcc7942_1195	0.29	-1.7
1,223,873	-		Synpcc7942_1195	0.30	-1.2
1,223,883	-		Synpcc7942_1195	0.32	+0.8
1,223,898	+		Synpcc7942_1195	0.35	-1.5
1,223,912	-		Synpcc7942_1195	0.38	+2.1
1,223,948	-		Synpcc7942_1195	0.45	+2.9
1,223,966	+		Synpcc7942_1195	0.49	-0.6
1,223,982	+		Synpcc7942_1195	0.52	+0.7
1,223,982	+		Synpcc7942_1195	0.52	-0.2
1,223,989	+		Synpcc7942_1195	0.53	+0.6
1,223,990	-		Synpcc7942_1195	0.54	-1.6
1,224,019	+		Synpcc7942_1195	0.59	-0.6
1,224,026	+		Synpcc7942_1195	0.61	-1.0
1,224,026	+		Synpcc7942_1195	0.61	-0.1
1,224,034	-		Synpcc7942_1195	0.62	+2.0
1,224,036	-		Synpcc7942_1195	0.63	+2.0
1,224,036	-		Synpcc7942_1195	0.63	+1.7
1,224,076	-		Synpcc7942_1195	0.71	-0.2
1,224,086	-		Synpcc7942_1195	0.73	+1.0
1,224,111	-		Synpcc7942_1195	0.78	-3.1
1,224,111	-		Synpcc7942_1195	0.78	-0.4
1,224,145	+		Synpcc7942_1195	0.85	+1.0
1,224,167	+		Synpcc7942_1195	0.89	+2.2
1,224,279	+				-0.5
1,224,279	+				+0.3
1,224,279	+				-1.6
1,224,280	-				-0.0
1,224,287	-				+1.1
1,224,287	-				-0.7
1,224,292	-				+2.6
1,224,292	-				+1.5
1,224,432	+	sipA	Synpcc7942_1196	0.57	-0.5
1,224,443	+	sipA	Synpcc7942_1196	0.61	-1.5
1,224,454	-	sipA	Synpcc7942_1196	0.66	-0.9
1,224,475	-	sipA	Synpcc7942_1196	0.75	-1.3
1,224,475	-	sipA	Synpcc7942_1196	0.75	-0.9
1,224,495	+	sipA	Synpcc7942_1196	0.83	-2.4
1,224,529	+				+2.6
1,224,529	+				-1.7
1,224,530	+				+1.1
1,224,537	-				+4.1
1,224,537	-				+1.1
1,224,559	-				-1.4
1,224,561	+				-0.4
1,224,587	-				+0.0
1,224,593	-				+2.1
1,224,622	-				+0.1
1,224,623	-				-0.7
1,224,630	-				+2.1
1,224,663	-				+2.1
1,224,683	-				+1.1
1,224,684	-				-1.4
1,224,712	+				-0.7
1,224,716	+				-0.2
1,224,721	+				-0.5
1,224,753	-				-0.1
1,224,753	-				+1.1
1,224,754	-				+1.1
1,224,772	+				-0.8
1,224,772	+				+2.6
1,224,772	+				-0.1
1,224,792	+				+0.4
1,224,839	+				-0.2
1,224,839	+				+0.1
1,224,842	-				+1.6
1,224,846	-				-0.3
1,224,846	-				-0.9
1,224,847	-				-0.1
1,224,847	-				+2.1
1,224,853	-				-0.6
1,224,871	+				+0.8