Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06485 and H281DRAFT_06486 are separated by 130 nucleotides H281DRAFT_06486 and H281DRAFT_06487 are separated by 91 nucleotides
H281DRAFT_06485: H281DRAFT_06485 - c-di-GMP-related signal transduction protein, contains EAL and HDOD domains, at 23,541 to 24,920
_06485
H281DRAFT_06486: H281DRAFT_06486 - Predicted signal transduction protein, at 25,051 to 26,508
_06486
H281DRAFT_06487: H281DRAFT_06487 - diguanylate cyclase (GGDEF) domain-containing protein, at 26,600 to 28,414
_06487
Position (kb) 25
26
27 Strain fitness (log2 ratio) -1
0
1 at 24.414 kb on - strand, within H281DRAFT_06485 at 24.414 kb on - strand, within H281DRAFT_06485 at 25.024 kb on - strand at 25.024 kb on - strand at 25.024 kb on - strand at 26.289 kb on + strand, within H281DRAFT_06486 at 26.309 kb on + strand, within H281DRAFT_06486 at 26.309 kb on + strand at 26.309 kb on + strand, within H281DRAFT_06486 at 26.309 kb on + strand, within H281DRAFT_06486 at 26.310 kb on - strand, within H281DRAFT_06486 at 26.310 kb on - strand, within H281DRAFT_06486 at 26.310 kb on - strand, within H281DRAFT_06486 at 26.310 kb on - strand, within H281DRAFT_06486 at 26.310 kb on - strand, within H281DRAFT_06486 at 26.688 kb on - strand at 26.688 kb on - strand at 26.688 kb on - strand at 26.688 kb on - strand at 27.115 kb on - strand, within H281DRAFT_06487 at 27.360 kb on + strand, within H281DRAFT_06487 at 27.360 kb on + strand, within H281DRAFT_06487 at 27.418 kb on - strand, within H281DRAFT_06487 at 27.418 kb on - strand, within H281DRAFT_06487
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 24,414 - H281DRAFT_06485 0.63 -0.0 24,414 - H281DRAFT_06485 0.63 +0.7 25,024 - +1.3 25,024 - -1.7 25,024 - +0.2 26,289 + H281DRAFT_06486 0.85 -0.0 26,309 + H281DRAFT_06486 0.86 -0.3 26,309 + +0.5 26,309 + H281DRAFT_06486 0.86 -0.4 26,309 + H281DRAFT_06486 0.86 -0.0 26,310 - H281DRAFT_06486 0.86 +1.4 26,310 - H281DRAFT_06486 0.86 -1.5 26,310 - H281DRAFT_06486 0.86 -0.7 26,310 - H281DRAFT_06486 0.86 -0.1 26,310 - H281DRAFT_06486 0.86 -0.1 26,688 - -1.4 26,688 - -0.6 26,688 - -1.1 26,688 - +1.5 27,115 - H281DRAFT_06487 0.28 -0.0 27,360 + H281DRAFT_06487 0.42 +0.2 27,360 + H281DRAFT_06487 0.42 -0.7 27,418 - H281DRAFT_06487 0.45 -0.2 27,418 - H281DRAFT_06487 0.45 +1.2
Or see this region's nucleotide sequence