Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06386 and H281DRAFT_06387 are separated by 163 nucleotides H281DRAFT_06387 and H281DRAFT_06388 are separated by 163 nucleotides
H281DRAFT_06386: H281DRAFT_06386 - Sugar phosphate permease, at 57,955 to 59,259
_06386
H281DRAFT_06387: H281DRAFT_06387 - GntR family transcriptional regulator, at 59,423 to 60,166
_06387
H281DRAFT_06388: H281DRAFT_06388 - Sugar phosphate permease, at 60,330 to 61,643
_06388
Position (kb) 59
60
61 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 58.475 kb on + strand, within H281DRAFT_06386 at 58.487 kb on + strand at 58.511 kb on + strand, within H281DRAFT_06386 at 58.511 kb on + strand, within H281DRAFT_06386 at 58.512 kb on - strand, within H281DRAFT_06386 at 58.512 kb on - strand, within H281DRAFT_06386 at 58.844 kb on + strand, within H281DRAFT_06386 at 58.844 kb on + strand, within H281DRAFT_06386 at 58.845 kb on - strand, within H281DRAFT_06386 at 58.872 kb on - strand, within H281DRAFT_06386 at 58.874 kb on + strand, within H281DRAFT_06386 at 58.875 kb on - strand, within H281DRAFT_06386 at 58.931 kb on + strand, within H281DRAFT_06386 at 59.096 kb on + strand, within H281DRAFT_06386 at 59.246 kb on - strand at 59.352 kb on - strand at 59.637 kb on + strand, within H281DRAFT_06387 at 59.791 kb on + strand, within H281DRAFT_06387 at 60.180 kb on + strand at 60.180 kb on + strand at 60.192 kb on + strand at 60.192 kb on + strand at 60.196 kb on + strand at 60.196 kb on + strand at 60.197 kb on - strand at 60.202 kb on - strand at 61.054 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 58,475 + H281DRAFT_06386 0.40 +0.8 58,487 + +2.1 58,511 + H281DRAFT_06386 0.43 +0.0 58,511 + H281DRAFT_06386 0.43 +0.9 58,512 - H281DRAFT_06386 0.43 -1.2 58,512 - H281DRAFT_06386 0.43 +0.1 58,844 + H281DRAFT_06386 0.68 -1.8 58,844 + H281DRAFT_06386 0.68 -2.9 58,845 - H281DRAFT_06386 0.68 -0.5 58,872 - H281DRAFT_06386 0.70 -2.7 58,874 + H281DRAFT_06386 0.70 -0.1 58,875 - H281DRAFT_06386 0.70 +1.3 58,931 + H281DRAFT_06386 0.75 -0.2 59,096 + H281DRAFT_06386 0.87 +0.3 59,246 - +0.2 59,352 - +0.1 59,637 + H281DRAFT_06387 0.29 -0.3 59,791 + H281DRAFT_06387 0.49 -1.5 60,180 + +1.3 60,180 + +0.5 60,192 + -1.5 60,192 + -0.9 60,196 + -0.8 60,196 + -1.6 60,197 - -1.3 60,202 - +0.9 61,054 - +0.1
Or see this region's nucleotide sequence