Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05807 and H281DRAFT_05808 are separated by 13 nucleotides H281DRAFT_05808 and H281DRAFT_05809 are separated by 288 nucleotides
H281DRAFT_05807: H281DRAFT_05807 - hypothetical protein, at 83,061 to 84,233
_05807
H281DRAFT_05808: H281DRAFT_05808 - Tfp pilus assembly protein PilF, at 84,247 to 85,980
_05808
H281DRAFT_05809: H281DRAFT_05809 - Uncharacterized membrane protein, at 86,269 to 87,225
_05809
Position (kb) 84
85
86 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7 at 83.408 kb on + strand, within H281DRAFT_05807 at 83.418 kb on + strand, within H281DRAFT_05807 at 83.438 kb on + strand, within H281DRAFT_05807 at 83.448 kb on + strand, within H281DRAFT_05807 at 83.448 kb on + strand, within H281DRAFT_05807 at 83.449 kb on - strand, within H281DRAFT_05807 at 83.449 kb on - strand, within H281DRAFT_05807 at 83.575 kb on + strand, within H281DRAFT_05807 at 83.575 kb on + strand, within H281DRAFT_05807 at 83.576 kb on - strand, within H281DRAFT_05807 at 83.604 kb on + strand, within H281DRAFT_05807 at 83.605 kb on - strand, within H281DRAFT_05807 at 83.751 kb on + strand, within H281DRAFT_05807 at 83.812 kb on + strand at 83.812 kb on + strand, within H281DRAFT_05807 at 83.812 kb on + strand, within H281DRAFT_05807 at 83.812 kb on + strand, within H281DRAFT_05807 at 83.812 kb on + strand, within H281DRAFT_05807 at 83.812 kb on + strand, within H281DRAFT_05807 at 83.812 kb on + strand, within H281DRAFT_05807 at 83.813 kb on - strand at 83.813 kb on - strand, within H281DRAFT_05807 at 83.813 kb on - strand, within H281DRAFT_05807 at 83.813 kb on - strand, within H281DRAFT_05807 at 83.813 kb on - strand, within H281DRAFT_05807 at 83.815 kb on - strand, within H281DRAFT_05807 at 83.815 kb on - strand, within H281DRAFT_05807 at 83.924 kb on + strand, within H281DRAFT_05807 at 83.924 kb on + strand at 83.925 kb on - strand, within H281DRAFT_05807 at 84.248 kb on + strand at 84.768 kb on - strand, within H281DRAFT_05808 at 84.768 kb on - strand, within H281DRAFT_05808 at 84.845 kb on + strand, within H281DRAFT_05808 at 84.846 kb on - strand, within H281DRAFT_05808 at 84.876 kb on + strand, within H281DRAFT_05808 at 84.877 kb on - strand, within H281DRAFT_05808 at 84.880 kb on + strand, within H281DRAFT_05808 at 84.880 kb on + strand, within H281DRAFT_05808 at 84.934 kb on + strand, within H281DRAFT_05808 at 85.093 kb on - strand, within H281DRAFT_05808 at 85.211 kb on + strand, within H281DRAFT_05808 at 85.212 kb on - strand, within H281DRAFT_05808 at 85.699 kb on + strand, within H281DRAFT_05808 at 85.699 kb on + strand, within H281DRAFT_05808 at 85.718 kb on + strand, within H281DRAFT_05808 at 85.856 kb on + strand at 85.856 kb on + strand at 85.922 kb on + strand at 85.923 kb on - strand at 85.990 kb on - strand at 86.103 kb on + strand at 86.123 kb on + strand at 86.124 kb on - strand at 86.259 kb on - strand at 86.328 kb on + strand at 86.333 kb on - strand at 86.582 kb on + strand, within H281DRAFT_05809 at 86.583 kb on - strand, within H281DRAFT_05809 at 86.583 kb on - strand, within H281DRAFT_05809 at 86.620 kb on - strand, within H281DRAFT_05809 at 86.621 kb on + strand, within H281DRAFT_05809
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 83,408 + H281DRAFT_05807 0.30 +0.9 83,418 + H281DRAFT_05807 0.30 -0.8 83,438 + H281DRAFT_05807 0.32 +0.3 83,448 + H281DRAFT_05807 0.33 -1.4 83,448 + H281DRAFT_05807 0.33 +0.6 83,449 - H281DRAFT_05807 0.33 +0.1 83,449 - H281DRAFT_05807 0.33 +0.3 83,575 + H281DRAFT_05807 0.44 -1.0 83,575 + H281DRAFT_05807 0.44 +0.6 83,576 - H281DRAFT_05807 0.44 -1.3 83,604 + H281DRAFT_05807 0.46 +1.2 83,605 - H281DRAFT_05807 0.46 -1.4 83,751 + H281DRAFT_05807 0.59 -0.5 83,812 + +3.1 83,812 + H281DRAFT_05807 0.64 -1.2 83,812 + H281DRAFT_05807 0.64 +1.3 83,812 + H281DRAFT_05807 0.64 -0.7 83,812 + H281DRAFT_05807 0.64 -2.9 83,812 + H281DRAFT_05807 0.64 -1.9 83,812 + H281DRAFT_05807 0.64 -0.7 83,813 - +0.6 83,813 - H281DRAFT_05807 0.64 +0.4 83,813 - H281DRAFT_05807 0.64 +0.1 83,813 - H281DRAFT_05807 0.64 +0.7 83,813 - H281DRAFT_05807 0.64 +7.2 83,815 - H281DRAFT_05807 0.64 -0.0 83,815 - H281DRAFT_05807 0.64 -1.2 83,924 + H281DRAFT_05807 0.74 +0.3 83,924 + -0.9 83,925 - H281DRAFT_05807 0.74 +0.4 84,248 + +0.3 84,768 - H281DRAFT_05808 0.30 +0.2 84,768 - H281DRAFT_05808 0.30 +0.9 84,845 + H281DRAFT_05808 0.34 +1.3 84,846 - H281DRAFT_05808 0.35 +0.1 84,876 + H281DRAFT_05808 0.36 -0.0 84,877 - H281DRAFT_05808 0.36 -0.3 84,880 + H281DRAFT_05808 0.37 +0.9 84,880 + H281DRAFT_05808 0.37 -0.2 84,934 + H281DRAFT_05808 0.40 -1.0 85,093 - H281DRAFT_05808 0.49 +0.3 85,211 + H281DRAFT_05808 0.56 +1.0 85,212 - H281DRAFT_05808 0.56 -0.4 85,699 + H281DRAFT_05808 0.84 -0.3 85,699 + H281DRAFT_05808 0.84 +3.0 85,718 + H281DRAFT_05808 0.85 -0.3 85,856 + +0.5 85,856 + +0.1 85,922 + +0.3 85,923 - +0.1 85,990 - -0.4 86,103 + -0.9 86,123 + +0.6 86,124 - +0.3 86,259 - +1.2 86,328 + +0.6 86,333 - +0.6 86,582 + H281DRAFT_05809 0.33 +1.5 86,583 - H281DRAFT_05809 0.33 -1.2 86,583 - H281DRAFT_05809 0.33 +0.8 86,620 - H281DRAFT_05809 0.37 -2.6 86,621 + H281DRAFT_05809 0.37 -2.7
Or see this region's nucleotide sequence