Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05802 and H281DRAFT_05803 are separated by 150 nucleotides H281DRAFT_05803 and H281DRAFT_05804 are separated by 6 nucleotides H281DRAFT_05804 and H281DRAFT_05805 are separated by 0 nucleotides
H281DRAFT_05802: H281DRAFT_05802 - dipeptide transport system substrate-binding protein, at 77,334 to 78,962
_05802
H281DRAFT_05803: H281DRAFT_05803 - dipeptide transport system permease protein, at 79,113 to 80,123
_05803
H281DRAFT_05804: H281DRAFT_05804 - dipeptide transport system permease protein, at 80,130 to 81,047
_05804
H281DRAFT_05805: H281DRAFT_05805 - dipeptide transport system ATP-binding protein, at 81,048 to 82,052
_05805
Position (kb) 79
80
81 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 78.157 kb on - strand, within H281DRAFT_05802 at 78.157 kb on - strand, within H281DRAFT_05802 at 78.238 kb on - strand, within H281DRAFT_05802 at 78.246 kb on + strand, within H281DRAFT_05802 at 78.336 kb on + strand, within H281DRAFT_05802 at 78.336 kb on + strand, within H281DRAFT_05802 at 78.336 kb on + strand, within H281DRAFT_05802 at 78.390 kb on + strand, within H281DRAFT_05802 at 78.390 kb on + strand, within H281DRAFT_05802 at 78.391 kb on - strand, within H281DRAFT_05802 at 78.391 kb on - strand, within H281DRAFT_05802 at 78.391 kb on - strand, within H281DRAFT_05802 at 78.418 kb on - strand, within H281DRAFT_05802 at 78.429 kb on - strand, within H281DRAFT_05802 at 78.510 kb on + strand, within H281DRAFT_05802 at 78.510 kb on + strand, within H281DRAFT_05802 at 78.591 kb on + strand, within H281DRAFT_05802 at 78.591 kb on + strand, within H281DRAFT_05802 at 78.591 kb on + strand, within H281DRAFT_05802 at 78.592 kb on - strand, within H281DRAFT_05802 at 78.592 kb on - strand, within H281DRAFT_05802 at 78.607 kb on - strand, within H281DRAFT_05802 at 78.744 kb on + strand, within H281DRAFT_05802 at 78.744 kb on + strand, within H281DRAFT_05802 at 78.744 kb on + strand, within H281DRAFT_05802 at 78.744 kb on + strand, within H281DRAFT_05802 at 78.744 kb on + strand, within H281DRAFT_05802 at 78.744 kb on + strand, within H281DRAFT_05802 at 78.744 kb on + strand, within H281DRAFT_05802 at 78.744 kb on + strand, within H281DRAFT_05802 at 78.745 kb on - strand, within H281DRAFT_05802 at 78.814 kb on - strand at 78.814 kb on - strand at 78.879 kb on + strand at 78.961 kb on - strand at 79.005 kb on + strand at 79.005 kb on + strand at 79.006 kb on - strand at 79.308 kb on + strand, within H281DRAFT_05803 at 79.308 kb on + strand, within H281DRAFT_05803 at 79.309 kb on - strand, within H281DRAFT_05803 at 79.309 kb on - strand, within H281DRAFT_05803 at 79.629 kb on + strand, within H281DRAFT_05803 at 79.629 kb on + strand, within H281DRAFT_05803 at 79.630 kb on - strand, within H281DRAFT_05803 at 79.809 kb on + strand, within H281DRAFT_05803 at 79.809 kb on + strand, within H281DRAFT_05803 at 79.810 kb on - strand, within H281DRAFT_05803 at 79.810 kb on - strand, within H281DRAFT_05803 at 79.939 kb on + strand, within H281DRAFT_05803 at 80.115 kb on - strand at 80.265 kb on - strand, within H281DRAFT_05804 at 80.531 kb on + strand, within H281DRAFT_05804 at 80.665 kb on - strand, within H281DRAFT_05804 at 80.712 kb on + strand, within H281DRAFT_05804 at 80.712 kb on + strand, within H281DRAFT_05804 at 80.713 kb on - strand, within H281DRAFT_05804 at 80.713 kb on - strand, within H281DRAFT_05804 at 81.058 kb on + strand at 81.059 kb on - strand at 81.059 kb on - strand at 81.098 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 78,157 - H281DRAFT_05802 0.51 -3.0 78,157 - H281DRAFT_05802 0.51 -0.2 78,238 - H281DRAFT_05802 0.55 -0.2 78,246 + H281DRAFT_05802 0.56 +1.7 78,336 + H281DRAFT_05802 0.62 -1.3 78,336 + H281DRAFT_05802 0.62 -0.3 78,336 + H281DRAFT_05802 0.62 +2.0 78,390 + H281DRAFT_05802 0.65 +0.3 78,390 + H281DRAFT_05802 0.65 +1.3 78,391 - H281DRAFT_05802 0.65 +0.4 78,391 - H281DRAFT_05802 0.65 -0.0 78,391 - H281DRAFT_05802 0.65 +0.8 78,418 - H281DRAFT_05802 0.67 +1.2 78,429 - H281DRAFT_05802 0.67 +2.1 78,510 + H281DRAFT_05802 0.72 -1.0 78,510 + H281DRAFT_05802 0.72 +1.2 78,591 + H281DRAFT_05802 0.77 +2.0 78,591 + H281DRAFT_05802 0.77 -0.1 78,591 + H281DRAFT_05802 0.77 +0.6 78,592 - H281DRAFT_05802 0.77 +0.1 78,592 - H281DRAFT_05802 0.77 +0.2 78,607 - H281DRAFT_05802 0.78 +2.1 78,744 + H281DRAFT_05802 0.87 +0.5 78,744 + H281DRAFT_05802 0.87 -1.1 78,744 + H281DRAFT_05802 0.87 +0.3 78,744 + H281DRAFT_05802 0.87 +0.2 78,744 + H281DRAFT_05802 0.87 +0.7 78,744 + H281DRAFT_05802 0.87 +0.6 78,744 + H281DRAFT_05802 0.87 -0.5 78,744 + H281DRAFT_05802 0.87 -0.1 78,745 - H281DRAFT_05802 0.87 +0.3 78,814 - +0.3 78,814 - -1.1 78,879 + -1.7 78,961 - -2.4 79,005 + +0.5 79,005 + +1.1 79,006 - -1.6 79,308 + H281DRAFT_05803 0.19 -0.3 79,308 + H281DRAFT_05803 0.19 +0.3 79,309 - H281DRAFT_05803 0.19 -0.4 79,309 - H281DRAFT_05803 0.19 +0.8 79,629 + H281DRAFT_05803 0.51 -0.5 79,629 + H281DRAFT_05803 0.51 -0.3 79,630 - H281DRAFT_05803 0.51 -1.3 79,809 + H281DRAFT_05803 0.69 -0.9 79,809 + H281DRAFT_05803 0.69 -0.6 79,810 - H281DRAFT_05803 0.69 -2.6 79,810 - H281DRAFT_05803 0.69 +0.2 79,939 + H281DRAFT_05803 0.82 -2.9 80,115 - -0.9 80,265 - H281DRAFT_05804 0.15 +0.6 80,531 + H281DRAFT_05804 0.44 -0.1 80,665 - H281DRAFT_05804 0.58 -0.4 80,712 + H281DRAFT_05804 0.63 -0.3 80,712 + H281DRAFT_05804 0.63 +1.2 80,713 - H281DRAFT_05804 0.64 +1.0 80,713 - H281DRAFT_05804 0.64 +1.7 81,058 + +1.0 81,059 - -1.2 81,059 - -0.8 81,098 - -0.4
Or see this region's nucleotide sequence