Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05672 and H281DRAFT_05673 are separated by 70 nucleotides H281DRAFT_05673 and H281DRAFT_05674 are separated by 19 nucleotides H281DRAFT_05674 and H281DRAFT_05675 are separated by 368 nucleotides
H281DRAFT_05672: H281DRAFT_05672 - RNA polymerase-associated protein, at 89,441 to 90,052
_05672
H281DRAFT_05673: H281DRAFT_05673 - stringent starvation protein B, at 90,123 to 90,641
_05673
H281DRAFT_05674: H281DRAFT_05674 - tRNA_Thr_TGT, at 90,661 to 90,736
_05674
H281DRAFT_05675: H281DRAFT_05675 - Methylase of polypeptide chain release factors, at 91,105 to 92,232
_05675
Position (kb) 90
91 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 90.165 kb on + strand at 90.166 kb on - strand at 90.189 kb on + strand, within H281DRAFT_05673 at 90.189 kb on + strand, within H281DRAFT_05673 at 90.288 kb on - strand, within H281DRAFT_05673 at 90.288 kb on - strand, within H281DRAFT_05673 at 90.378 kb on - strand, within H281DRAFT_05673 at 90.390 kb on + strand, within H281DRAFT_05673 at 90.390 kb on + strand, within H281DRAFT_05673 at 90.391 kb on - strand, within H281DRAFT_05673 at 90.391 kb on - strand, within H281DRAFT_05673 at 90.391 kb on - strand, within H281DRAFT_05673 at 90.614 kb on + strand at 90.634 kb on + strand at 90.634 kb on + strand at 90.645 kb on - strand at 90.738 kb on + strand at 90.738 kb on + strand at 90.738 kb on + strand at 90.738 kb on + strand at 90.739 kb on - strand at 90.886 kb on + strand at 90.938 kb on + strand at 90.939 kb on - strand at 90.950 kb on + strand at 90.950 kb on + strand at 90.950 kb on + strand at 90.951 kb on - strand at 90.951 kb on - strand at 90.981 kb on - strand at 90.981 kb on - strand at 90.983 kb on + strand at 90.984 kb on - strand at 90.984 kb on - strand at 91.070 kb on + strand at 91.070 kb on + strand at 91.237 kb on + strand, within H281DRAFT_05675 at 91.444 kb on + strand, within H281DRAFT_05675 at 91.445 kb on - strand, within H281DRAFT_05675 at 91.498 kb on + strand, within H281DRAFT_05675 at 91.499 kb on - strand, within H281DRAFT_05675 at 91.499 kb on - strand, within H281DRAFT_05675 at 91.622 kb on - strand, within H281DRAFT_05675 at 91.622 kb on - strand, within H281DRAFT_05675 at 91.654 kb on + strand, within H281DRAFT_05675 at 91.654 kb on + strand, within H281DRAFT_05675 at 91.655 kb on - strand, within H281DRAFT_05675 at 91.655 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 90,165 + +0.3 90,166 - -1.6 90,189 + H281DRAFT_05673 0.13 -2.4 90,189 + H281DRAFT_05673 0.13 +0.0 90,288 - H281DRAFT_05673 0.32 +0.3 90,288 - H281DRAFT_05673 0.32 -3.8 90,378 - H281DRAFT_05673 0.49 -2.1 90,390 + H281DRAFT_05673 0.51 -0.6 90,390 + H281DRAFT_05673 0.51 -1.3 90,391 - H281DRAFT_05673 0.52 -0.3 90,391 - H281DRAFT_05673 0.52 -0.4 90,391 - H281DRAFT_05673 0.52 -1.2 90,614 + -0.3 90,634 + +0.1 90,634 + -3.3 90,645 - +0.4 90,738 + -0.4 90,738 + -0.4 90,738 + +2.0 90,738 + -1.4 90,739 - -0.0 90,886 + -0.6 90,938 + -0.1 90,939 - +0.5 90,950 + -0.1 90,950 + +0.1 90,950 + -1.8 90,951 - -1.5 90,951 - -2.4 90,981 - -0.1 90,981 - -2.4 90,983 + +1.6 90,984 - +1.0 90,984 - -2.3 91,070 + +0.5 91,070 + +1.4 91,237 + H281DRAFT_05675 0.12 -0.4 91,444 + H281DRAFT_05675 0.30 -1.0 91,445 - H281DRAFT_05675 0.30 +0.3 91,498 + H281DRAFT_05675 0.35 -1.3 91,499 - H281DRAFT_05675 0.35 -1.1 91,499 - H281DRAFT_05675 0.35 -0.2 91,622 - H281DRAFT_05675 0.46 -0.5 91,622 - H281DRAFT_05675 0.46 -1.1 91,654 + H281DRAFT_05675 0.49 -0.3 91,654 + H281DRAFT_05675 0.49 -2.2 91,655 - H281DRAFT_05675 0.49 +0.6 91,655 - +0.4
Or see this region's nucleotide sequence