Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05317 and H281DRAFT_05318 are separated by 163 nucleotides H281DRAFT_05318 and H281DRAFT_05319 are separated by 183 nucleotides
H281DRAFT_05317: H281DRAFT_05317 - transcriptional regulator, GntR family, at 67,465 to 68,208
_05317
H281DRAFT_05318: H281DRAFT_05318 - MFS transporter, ACS family, glucarate transporter, at 68,372 to 69,721
_05318
H281DRAFT_05319: H281DRAFT_05319 - 5-dehydro-4-deoxyglucarate dehydratase, at 69,905 to 70,822
_05319
Position (kb) 68
69
70 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 67.427 kb on + strand at 67.427 kb on + strand at 67.428 kb on - strand at 67.470 kb on + strand at 67.470 kb on + strand at 67.471 kb on - strand at 68.163 kb on + strand at 68.231 kb on + strand at 68.259 kb on - strand at 68.398 kb on + strand at 68.398 kb on + strand at 68.421 kb on + strand at 68.421 kb on + strand at 68.682 kb on + strand, within H281DRAFT_05318 at 68.683 kb on - strand, within H281DRAFT_05318 at 68.884 kb on - strand, within H281DRAFT_05318 at 68.911 kb on - strand, within H281DRAFT_05318 at 68.931 kb on + strand, within H281DRAFT_05318 at 69.028 kb on + strand, within H281DRAFT_05318 at 69.029 kb on - strand, within H281DRAFT_05318 at 69.066 kb on + strand, within H281DRAFT_05318 at 69.066 kb on + strand, within H281DRAFT_05318 at 69.067 kb on - strand, within H281DRAFT_05318 at 69.143 kb on + strand, within H281DRAFT_05318 at 69.169 kb on - strand, within H281DRAFT_05318 at 69.221 kb on + strand, within H281DRAFT_05318 at 69.221 kb on + strand, within H281DRAFT_05318 at 69.237 kb on + strand, within H281DRAFT_05318 at 69.517 kb on - strand, within H281DRAFT_05318 at 69.517 kb on - strand, within H281DRAFT_05318 at 69.543 kb on + strand, within H281DRAFT_05318 at 69.544 kb on - strand, within H281DRAFT_05318 at 69.544 kb on - strand, within H281DRAFT_05318 at 69.622 kb on - strand at 69.638 kb on + strand at 69.639 kb on - strand at 69.646 kb on + strand at 69.647 kb on - strand at 69.733 kb on + strand at 69.733 kb on + strand at 69.734 kb on - strand at 69.740 kb on + strand at 69.740 kb on + strand at 69.741 kb on - strand at 69.741 kb on - strand at 69.741 kb on - strand at 70.173 kb on - strand, within H281DRAFT_05319 at 70.209 kb on + strand, within H281DRAFT_05319 at 70.210 kb on - strand, within H281DRAFT_05319 at 70.395 kb on + strand, within H281DRAFT_05319 at 70.395 kb on + strand, within H281DRAFT_05319 at 70.396 kb on - strand, within H281DRAFT_05319 at 70.479 kb on + strand, within H281DRAFT_05319 at 70.479 kb on + strand, within H281DRAFT_05319 at 70.480 kb on - strand, within H281DRAFT_05319 at 70.639 kb on + strand, within H281DRAFT_05319 at 70.640 kb on - strand, within H281DRAFT_05319
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 67,427 + -0.7 67,427 + +0.3 67,428 - +1.0 67,470 + +0.7 67,470 + +0.2 67,471 - +0.5 68,163 + +0.7 68,231 + +3.3 68,259 - +1.5 68,398 + -0.6 68,398 + +1.3 68,421 + -0.5 68,421 + -1.2 68,682 + H281DRAFT_05318 0.23 -1.2 68,683 - H281DRAFT_05318 0.23 -0.2 68,884 - H281DRAFT_05318 0.38 -1.2 68,911 - H281DRAFT_05318 0.40 +0.6 68,931 + H281DRAFT_05318 0.41 -0.8 69,028 + H281DRAFT_05318 0.49 +1.0 69,029 - H281DRAFT_05318 0.49 +0.6 69,066 + H281DRAFT_05318 0.51 -0.8 69,066 + H281DRAFT_05318 0.51 +1.4 69,067 - H281DRAFT_05318 0.51 +0.4 69,143 + H281DRAFT_05318 0.57 +0.0 69,169 - H281DRAFT_05318 0.59 +0.9 69,221 + H281DRAFT_05318 0.63 +0.9 69,221 + H281DRAFT_05318 0.63 -2.2 69,237 + H281DRAFT_05318 0.64 +0.2 69,517 - H281DRAFT_05318 0.85 -1.2 69,517 - H281DRAFT_05318 0.85 +1.4 69,543 + H281DRAFT_05318 0.87 -0.6 69,544 - H281DRAFT_05318 0.87 -0.9 69,544 - H281DRAFT_05318 0.87 +1.6 69,622 - -1.0 69,638 + +1.6 69,639 - -0.1 69,646 + +1.0 69,647 - +0.8 69,733 + -0.5 69,733 + -0.5 69,734 - +1.7 69,740 + -0.5 69,740 + -0.6 69,741 - -0.6 69,741 - +0.5 69,741 - -1.0 70,173 - H281DRAFT_05319 0.29 -2.3 70,209 + H281DRAFT_05319 0.33 -0.7 70,210 - H281DRAFT_05319 0.33 -1.4 70,395 + H281DRAFT_05319 0.53 -0.5 70,395 + H281DRAFT_05319 0.53 +0.4 70,396 - H281DRAFT_05319 0.53 -0.2 70,479 + H281DRAFT_05319 0.63 +0.8 70,479 + H281DRAFT_05319 0.63 -0.2 70,480 - H281DRAFT_05319 0.63 -2.4 70,639 + H281DRAFT_05319 0.80 -3.5 70,640 - H281DRAFT_05319 0.80 -2.2
Or see this region's nucleotide sequence