Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04436 and H281DRAFT_04437 are separated by 213 nucleotides H281DRAFT_04437 and H281DRAFT_04438 are separated by 43 nucleotides H281DRAFT_04438 and H281DRAFT_04439 are separated by 346 nucleotides
H281DRAFT_04436: H281DRAFT_04436 - phospholipase C, at 152,266 to 153,843
_04436
H281DRAFT_04437: H281DRAFT_04437 - cytochrome c peroxidase, at 154,057 to 155,499
_04437
H281DRAFT_04438: H281DRAFT_04438 - hypothetical protein, at 155,543 to 155,782
_04438
H281DRAFT_04439: H281DRAFT_04439 - outer membrane surface antigen, at 156,129 to 156,518
_04439
Position (kb) 154
155
156 Strain fitness (log2 ratio) -2
-1
0
1
2 at 153.357 kb on - strand, within H281DRAFT_04436 at 153.440 kb on + strand, within H281DRAFT_04436 at 153.441 kb on - strand, within H281DRAFT_04436 at 153.453 kb on - strand, within H281DRAFT_04436 at 153.720 kb on - strand at 153.786 kb on - strand at 153.786 kb on - strand at 153.849 kb on + strand at 153.850 kb on - strand at 153.944 kb on + strand at 153.945 kb on - strand at 154.017 kb on + strand at 154.018 kb on - strand at 154.378 kb on + strand, within H281DRAFT_04437 at 154.378 kb on + strand, within H281DRAFT_04437 at 154.780 kb on + strand, within H281DRAFT_04437 at 154.895 kb on - strand, within H281DRAFT_04437 at 154.900 kb on + strand, within H281DRAFT_04437 at 154.901 kb on - strand, within H281DRAFT_04437 at 154.913 kb on - strand, within H281DRAFT_04437 at 155.016 kb on + strand, within H281DRAFT_04437 at 155.017 kb on - strand, within H281DRAFT_04437 at 155.017 kb on - strand, within H281DRAFT_04437 at 155.017 kb on - strand, within H281DRAFT_04437 at 155.125 kb on + strand, within H281DRAFT_04437 at 155.125 kb on + strand, within H281DRAFT_04437 at 155.126 kb on - strand, within H281DRAFT_04437 at 155.247 kb on + strand, within H281DRAFT_04437 at 155.247 kb on + strand, within H281DRAFT_04437 at 155.247 kb on + strand, within H281DRAFT_04437 at 155.248 kb on - strand, within H281DRAFT_04437 at 155.248 kb on - strand, within H281DRAFT_04437 at 155.251 kb on + strand, within H281DRAFT_04437 at 155.252 kb on - strand, within H281DRAFT_04437 at 155.281 kb on + strand, within H281DRAFT_04437 at 155.382 kb on + strand at 155.483 kb on - strand at 155.483 kb on - strand at 155.548 kb on + strand at 155.548 kb on + strand at 155.548 kb on + strand at 155.548 kb on + strand at 155.820 kb on - strand at 155.831 kb on + strand at 155.854 kb on + strand at 155.869 kb on - strand at 155.869 kb on - strand at 155.885 kb on - strand at 155.899 kb on - strand at 155.899 kb on - strand at 155.899 kb on - strand at 155.899 kb on - strand at 155.903 kb on - strand at 155.903 kb on - strand at 156.042 kb on - strand at 156.042 kb on - strand at 156.042 kb on - strand at 156.042 kb on - strand at 156.105 kb on - strand at 156.112 kb on - strand at 156.243 kb on + strand, within H281DRAFT_04439 at 156.243 kb on + strand, within H281DRAFT_04439 at 156.244 kb on - strand, within H281DRAFT_04439 at 156.244 kb on - strand, within H281DRAFT_04439
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 153,357 - H281DRAFT_04436 0.69 -0.3 153,440 + H281DRAFT_04436 0.74 -1.0 153,441 - H281DRAFT_04436 0.74 -0.2 153,453 - H281DRAFT_04436 0.75 -0.6 153,720 - -0.9 153,786 - +1.2 153,786 - -0.4 153,849 + -1.1 153,850 - -0.7 153,944 + -1.1 153,945 - -2.1 154,017 + -0.3 154,018 - +2.4 154,378 + H281DRAFT_04437 0.22 +0.3 154,378 + H281DRAFT_04437 0.22 -1.4 154,780 + H281DRAFT_04437 0.50 +0.6 154,895 - H281DRAFT_04437 0.58 +0.0 154,900 + H281DRAFT_04437 0.58 -1.3 154,901 - H281DRAFT_04437 0.58 -0.5 154,913 - H281DRAFT_04437 0.59 -0.8 155,016 + H281DRAFT_04437 0.66 -0.7 155,017 - H281DRAFT_04437 0.67 +0.8 155,017 - H281DRAFT_04437 0.67 +0.4 155,017 - H281DRAFT_04437 0.67 +1.0 155,125 + H281DRAFT_04437 0.74 -1.0 155,125 + H281DRAFT_04437 0.74 -1.7 155,126 - H281DRAFT_04437 0.74 -0.6 155,247 + H281DRAFT_04437 0.82 -1.7 155,247 + H281DRAFT_04437 0.82 +1.8 155,247 + H281DRAFT_04437 0.82 -0.6 155,248 - H281DRAFT_04437 0.83 +0.8 155,248 - H281DRAFT_04437 0.83 -0.6 155,251 + H281DRAFT_04437 0.83 +1.3 155,252 - H281DRAFT_04437 0.83 +0.4 155,281 + H281DRAFT_04437 0.85 -1.3 155,382 + +0.0 155,483 - -0.0 155,483 - +0.2 155,548 + -0.2 155,548 + -0.5 155,548 + -0.5 155,548 + +0.8 155,820 - -1.5 155,831 + -0.5 155,854 + +0.2 155,869 - +0.9 155,869 - +0.2 155,885 - +0.8 155,899 - -0.2 155,899 - +0.7 155,899 - -0.6 155,899 - +0.3 155,903 - +0.5 155,903 - -0.5 156,042 - +0.1 156,042 - +0.5 156,042 - +0.2 156,042 - -1.2 156,105 - +0.8 156,112 - -0.0 156,243 + H281DRAFT_04439 0.29 -0.6 156,243 + H281DRAFT_04439 0.29 -0.2 156,244 - H281DRAFT_04439 0.29 -0.0 156,244 - H281DRAFT_04439 0.29 -1.1
Or see this region's nucleotide sequence