Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04403 and H281DRAFT_04404 are separated by 230 nucleotides H281DRAFT_04404 and H281DRAFT_04405 are separated by 11 nucleotides H281DRAFT_04405 and H281DRAFT_04406 are separated by 142 nucleotides H281DRAFT_04406 and H281DRAFT_04407 are separated by 223 nucleotides
H281DRAFT_04403: H281DRAFT_04403 - carbamoyl-phosphate synthase large subunit, at 119,446 to 122,700
_04403
H281DRAFT_04404: H281DRAFT_04404 - GreA/GreB family elongation factor, at 122,931 to 123,407
_04404
H281DRAFT_04405: H281DRAFT_04405 - protein of unknown function (DUF4149), at 123,419 to 123,937
_04405
H281DRAFT_04406: H281DRAFT_04406 - putative RNA-binding protein, YhbY family, at 124,080 to 124,607
_04406
H281DRAFT_04407: H281DRAFT_04407 - 23S rRNA Um-2552 2'-O-methyltransferase, at 124,831 to 125,493
_04407
Position (kb)
123
124 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 122.672 kb on + strand at 122.673 kb on - strand at 122.725 kb on + strand at 122.725 kb on + strand at 122.726 kb on - strand at 122.726 kb on - strand at 122.726 kb on - strand at 122.726 kb on - strand at 122.726 kb on - strand at 122.804 kb on + strand at 122.930 kb on + strand at 122.939 kb on + strand at 122.940 kb on - strand at 122.940 kb on - strand at 123.072 kb on + strand, within H281DRAFT_04404 at 123.072 kb on + strand, within H281DRAFT_04404 at 123.072 kb on + strand, within H281DRAFT_04404 at 123.378 kb on + strand at 123.379 kb on - strand at 123.395 kb on + strand at 123.396 kb on - strand at 123.396 kb on - strand at 123.396 kb on - strand at 123.399 kb on + strand at 123.701 kb on + strand, within H281DRAFT_04405 at 123.780 kb on - strand, within H281DRAFT_04405 at 123.780 kb on - strand, within H281DRAFT_04405 at 123.780 kb on - strand, within H281DRAFT_04405 at 123.780 kb on - strand, within H281DRAFT_04405 at 123.780 kb on - strand, within H281DRAFT_04405 at 123.780 kb on - strand, within H281DRAFT_04405 at 123.824 kb on + strand, within H281DRAFT_04405 at 123.825 kb on - strand, within H281DRAFT_04405 at 123.825 kb on - strand, within H281DRAFT_04405 at 123.935 kb on + strand at 123.936 kb on - strand at 124.045 kb on - strand at 124.081 kb on + strand at 124.081 kb on + strand at 124.082 kb on - strand at 124.082 kb on - strand at 124.082 kb on - strand at 124.349 kb on + strand, within H281DRAFT_04406 at 124.367 kb on + strand, within H281DRAFT_04406 at 124.411 kb on + strand, within H281DRAFT_04406 at 124.651 kb on + strand at 124.692 kb on + strand at 124.706 kb on + strand at 124.743 kb on + strand at 124.743 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 122,672 + -1.9 122,673 - -1.1 122,725 + -1.1 122,725 + +1.0 122,726 - -2.3 122,726 - +1.1 122,726 - +2.4 122,726 - +3.3 122,726 - +0.1 122,804 + +1.1 122,930 + +0.7 122,939 + +0.9 122,940 - +0.1 122,940 - +1.2 123,072 + H281DRAFT_04404 0.30 -1.3 123,072 + H281DRAFT_04404 0.30 +2.0 123,072 + H281DRAFT_04404 0.30 +0.2 123,378 + -0.1 123,379 - +0.4 123,395 + -0.2 123,396 - +0.3 123,396 - -1.3 123,396 - +1.3 123,399 + +0.6 123,701 + H281DRAFT_04405 0.54 -0.2 123,780 - H281DRAFT_04405 0.70 -0.4 123,780 - H281DRAFT_04405 0.70 +0.0 123,780 - H281DRAFT_04405 0.70 +0.4 123,780 - H281DRAFT_04405 0.70 -0.1 123,780 - H281DRAFT_04405 0.70 +0.8 123,780 - H281DRAFT_04405 0.70 -0.5 123,824 + H281DRAFT_04405 0.78 -0.6 123,825 - H281DRAFT_04405 0.78 +0.8 123,825 - H281DRAFT_04405 0.78 +0.7 123,935 + -0.9 123,936 - +0.8 124,045 - -0.7 124,081 + -0.9 124,081 + +0.1 124,082 - +0.9 124,082 - -0.2 124,082 - +1.1 124,349 + H281DRAFT_04406 0.51 -0.5 124,367 + H281DRAFT_04406 0.54 -2.1 124,411 + H281DRAFT_04406 0.63 -0.9 124,651 + -0.8 124,692 + -1.3 124,706 + -3.1 124,743 + -1.2 124,743 + -1.2
Or see this region's nucleotide sequence