Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03914 and H281DRAFT_03915 overlap by 35 nucleotides H281DRAFT_03915 and H281DRAFT_03916 are separated by 84 nucleotides
H281DRAFT_03914: H281DRAFT_03914 - D-alpha,beta-D-heptose 7-phosphate 1-kinase (EC 2.7.1.167), at 10,626 to 11,645
_03914
H281DRAFT_03915: H281DRAFT_03915 - UDPglucose 6-dehydrogenase, at 11,611 to 13,014
_03915
H281DRAFT_03916: H281DRAFT_03916 - Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain, at 13,099 to 14,274
_03916
Position (kb) 11
12
13
14 Strain fitness (log2 ratio) -1
0
1
2
3
4
5
6
7 at 10.789 kb on + strand, within H281DRAFT_03914 at 11.462 kb on + strand, within H281DRAFT_03914 at 11.555 kb on + strand at 11.645 kb on + strand at 11.646 kb on - strand at 11.646 kb on - strand at 11.667 kb on - strand at 11.848 kb on - strand, within H281DRAFT_03915 at 12.360 kb on - strand, within H281DRAFT_03915 at 12.393 kb on - strand, within H281DRAFT_03915 at 12.429 kb on - strand, within H281DRAFT_03915 at 12.987 kb on - strand at 12.987 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 10,789 + H281DRAFT_03914 0.16 +6.0 11,462 + H281DRAFT_03914 0.82 +5.8 11,555 + +7.1 11,645 + +6.6 11,646 - -0.5 11,646 - +3.2 11,667 - +0.2 11,848 - H281DRAFT_03915 0.17 +0.8 12,360 - H281DRAFT_03915 0.53 +0.2 12,393 - H281DRAFT_03915 0.56 -0.2 12,429 - H281DRAFT_03915 0.58 +2.4 12,987 - +0.9 12,987 - -0.1
Or see this region's nucleotide sequence