Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03597 and H281DRAFT_03598 are separated by 449 nucleotides H281DRAFT_03598 and H281DRAFT_03599 are separated by 70 nucleotides H281DRAFT_03599 and H281DRAFT_03600 overlap by 14 nucleotides
H281DRAFT_03597: H281DRAFT_03597 - arsenate reductase, at 106,536 to 106,919
_03597
H281DRAFT_03598: H281DRAFT_03598 - hypothetical protein, at 107,369 to 107,659
_03598
H281DRAFT_03599: H281DRAFT_03599 - Putative zinc-finger, at 107,730 to 107,933
_03599
H281DRAFT_03600: H281DRAFT_03600 - RNA polymerase sigma-70 factor, ECF subfamily, at 107,920 to 108,675
_03600
Position (kb)
107
108 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 106.520 kb on - strand at 106.549 kb on - strand at 106.596 kb on - strand, within H281DRAFT_03597 at 106.605 kb on + strand, within H281DRAFT_03597 at 106.605 kb on + strand, within H281DRAFT_03597 at 106.605 kb on + strand, within H281DRAFT_03597 at 106.606 kb on - strand, within H281DRAFT_03597 at 106.606 kb on - strand, within H281DRAFT_03597 at 106.768 kb on + strand, within H281DRAFT_03597 at 106.783 kb on + strand, within H281DRAFT_03597 at 106.931 kb on + strand at 106.931 kb on + strand at 106.932 kb on - strand at 106.932 kb on - strand at 106.938 kb on + strand at 106.981 kb on + strand at 106.983 kb on + strand at 106.983 kb on + strand at 106.983 kb on + strand at 106.984 kb on - strand at 106.984 kb on - strand at 107.030 kb on - strand at 107.100 kb on - strand at 107.148 kb on - strand at 107.258 kb on + strand at 107.300 kb on + strand at 107.301 kb on - strand at 107.301 kb on - strand at 107.306 kb on - strand at 107.380 kb on - strand at 107.380 kb on - strand at 107.447 kb on + strand, within H281DRAFT_03598 at 107.447 kb on + strand, within H281DRAFT_03598 at 107.448 kb on - strand, within H281DRAFT_03598 at 107.448 kb on - strand, within H281DRAFT_03598 at 107.553 kb on + strand, within H281DRAFT_03598 at 107.553 kb on + strand, within H281DRAFT_03598 at 107.778 kb on - strand, within H281DRAFT_03599 at 107.778 kb on - strand, within H281DRAFT_03599 at 107.921 kb on + strand at 107.921 kb on + strand at 107.921 kb on + strand at 107.922 kb on - strand at 108.096 kb on + strand, within H281DRAFT_03600 at 108.115 kb on + strand, within H281DRAFT_03600 at 108.307 kb on - strand, within H281DRAFT_03600 at 108.348 kb on + strand, within H281DRAFT_03600 at 108.348 kb on + strand, within H281DRAFT_03600 at 108.349 kb on - strand, within H281DRAFT_03600 at 108.488 kb on + strand, within H281DRAFT_03600 at 108.532 kb on - strand, within H281DRAFT_03600
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 106,520 - +0.2 106,549 - -0.6 106,596 - H281DRAFT_03597 0.16 -0.4 106,605 + H281DRAFT_03597 0.18 -1.7 106,605 + H281DRAFT_03597 0.18 +0.5 106,605 + H281DRAFT_03597 0.18 +0.8 106,606 - H281DRAFT_03597 0.18 +0.1 106,606 - H281DRAFT_03597 0.18 +0.4 106,768 + H281DRAFT_03597 0.60 +0.0 106,783 + H281DRAFT_03597 0.64 -0.4 106,931 + -0.1 106,931 + +0.8 106,932 - +0.5 106,932 - -0.2 106,938 + -0.1 106,981 + +0.8 106,983 + +0.1 106,983 + -1.0 106,983 + +0.1 106,984 - +0.7 106,984 - -0.5 107,030 - +0.9 107,100 - -0.5 107,148 - +0.2 107,258 + -1.9 107,300 + -1.1 107,301 - -0.1 107,301 - -0.5 107,306 - +1.7 107,380 - -1.1 107,380 - +0.8 107,447 + H281DRAFT_03598 0.27 +0.7 107,447 + H281DRAFT_03598 0.27 +0.9 107,448 - H281DRAFT_03598 0.27 -0.6 107,448 - H281DRAFT_03598 0.27 -0.8 107,553 + H281DRAFT_03598 0.63 -0.9 107,553 + H281DRAFT_03598 0.63 +0.6 107,778 - H281DRAFT_03599 0.24 +0.6 107,778 - H281DRAFT_03599 0.24 +0.3 107,921 + -0.3 107,921 + -0.9 107,921 + +0.2 107,922 - -0.6 108,096 + H281DRAFT_03600 0.23 -0.9 108,115 + H281DRAFT_03600 0.26 -0.4 108,307 - H281DRAFT_03600 0.51 -0.7 108,348 + H281DRAFT_03600 0.57 -0.6 108,348 + H281DRAFT_03600 0.57 +0.6 108,349 - H281DRAFT_03600 0.57 -0.5 108,488 + H281DRAFT_03600 0.75 +0.3 108,532 - H281DRAFT_03600 0.81 -3.5
Or see this region's nucleotide sequence