Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03461 and H281DRAFT_03462 are separated by 360 nucleotides H281DRAFT_03462 and H281DRAFT_03463 are separated by 202 nucleotides H281DRAFT_03463 and H281DRAFT_03464 are separated by 87 nucleotides
H281DRAFT_03461: H281DRAFT_03461 - Predicted membrane protein, at 544,870 to 546,159
_03461
H281DRAFT_03462: H281DRAFT_03462 - membrane protein DedA, SNARE-associated domain, at 546,520 to 548,523
_03462
H281DRAFT_03463: H281DRAFT_03463 - hypothetical protein, at 548,726 to 549,076
_03463
H281DRAFT_03464: H281DRAFT_03464 - Organic hydroperoxide reductase OsmC/OhrA, at 549,164 to 549,640
_03464
Position (kb) 546
547
548
549 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 545.552 kb on + strand, within H281DRAFT_03461 at 545.552 kb on + strand, within H281DRAFT_03461 at 545.604 kb on + strand, within H281DRAFT_03461 at 545.607 kb on - strand, within H281DRAFT_03461 at 546.295 kb on + strand at 546.295 kb on + strand at 546.481 kb on + strand at 547.020 kb on - strand, within H281DRAFT_03462 at 547.245 kb on - strand, within H281DRAFT_03462 at 547.296 kb on - strand, within H281DRAFT_03462 at 547.296 kb on - strand, within H281DRAFT_03462 at 547.446 kb on - strand, within H281DRAFT_03462 at 547.450 kb on - strand, within H281DRAFT_03462 at 548.049 kb on + strand, within H281DRAFT_03462 at 548.137 kb on + strand, within H281DRAFT_03462 at 548.415 kb on + strand at 548.455 kb on + strand at 548.510 kb on + strand at 548.510 kb on + strand at 548.511 kb on - strand at 548.548 kb on + strand at 548.582 kb on - strand at 548.643 kb on + strand at 548.788 kb on + strand, within H281DRAFT_03463 at 549.074 kb on + strand at 549.150 kb on + strand at 549.185 kb on + strand at 549.185 kb on + strand at 549.185 kb on + strand at 549.185 kb on + strand at 549.186 kb on - strand at 549.186 kb on - strand at 549.429 kb on - strand, within H281DRAFT_03464
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 545,552 + H281DRAFT_03461 0.53 -0.4 545,552 + H281DRAFT_03461 0.53 -1.4 545,604 + H281DRAFT_03461 0.57 -1.2 545,607 - H281DRAFT_03461 0.57 +1.4 546,295 + -0.4 546,295 + -1.8 546,481 + -0.2 547,020 - H281DRAFT_03462 0.25 +0.5 547,245 - H281DRAFT_03462 0.36 +0.8 547,296 - H281DRAFT_03462 0.39 -1.2 547,296 - H281DRAFT_03462 0.39 -1.2 547,446 - H281DRAFT_03462 0.46 +0.7 547,450 - H281DRAFT_03462 0.46 -0.2 548,049 + H281DRAFT_03462 0.76 +0.4 548,137 + H281DRAFT_03462 0.81 -0.4 548,415 + -1.8 548,455 + +1.0 548,510 + -2.2 548,510 + +0.4 548,511 - +0.5 548,548 + +0.4 548,582 - -0.1 548,643 + -2.3 548,788 + H281DRAFT_03463 0.18 +0.6 549,074 + +0.5 549,150 + +2.2 549,185 + +2.1 549,185 + +0.8 549,185 + -2.8 549,185 + -1.3 549,186 - -0.7 549,186 - -0.2 549,429 - H281DRAFT_03464 0.56 -0.5
Or see this region's nucleotide sequence