Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03136 and H281DRAFT_03137 are separated by 283 nucleotides H281DRAFT_03137 and H281DRAFT_03138 are separated by 268 nucleotides
H281DRAFT_03136: H281DRAFT_03136 - Transglutaminase-like enzyme, putative cysteine protease, at 172,487 to 173,287
_03136
H281DRAFT_03137: H281DRAFT_03137 - putative proteasome-type protease, at 173,571 to 174,443
_03137
H281DRAFT_03138: H281DRAFT_03138 - Outer membrane protein (porin), at 174,712 to 175,914
_03138
Position (kb) 173
174
175 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 172.646 kb on + strand, within H281DRAFT_03136 at 172.663 kb on + strand, within H281DRAFT_03136 at 172.664 kb on - strand, within H281DRAFT_03136 at 172.688 kb on - strand, within H281DRAFT_03136 at 172.910 kb on + strand, within H281DRAFT_03136 at 172.911 kb on - strand, within H281DRAFT_03136 at 173.048 kb on + strand, within H281DRAFT_03136 at 173.049 kb on - strand, within H281DRAFT_03136 at 173.192 kb on + strand, within H281DRAFT_03136 at 173.325 kb on + strand at 173.528 kb on + strand at 173.529 kb on - strand at 173.570 kb on + strand at 173.571 kb on - strand at 173.577 kb on + strand at 173.577 kb on + strand at 173.577 kb on + strand at 173.578 kb on - strand at 173.584 kb on + strand at 173.585 kb on - strand at 173.585 kb on - strand at 173.958 kb on + strand, within H281DRAFT_03137 at 173.959 kb on - strand, within H281DRAFT_03137 at 174.159 kb on + strand, within H281DRAFT_03137 at 174.217 kb on - strand, within H281DRAFT_03137 at 174.217 kb on - strand, within H281DRAFT_03137 at 174.441 kb on + strand at 174.514 kb on + strand at 174.514 kb on + strand at 174.514 kb on + strand at 174.514 kb on + strand at 174.515 kb on - strand at 174.710 kb on + strand at 174.710 kb on + strand at 174.710 kb on + strand at 174.710 kb on + strand at 174.710 kb on + strand at 174.777 kb on - strand at 174.777 kb on - strand at 174.920 kb on + strand, within H281DRAFT_03138 at 174.921 kb on - strand, within H281DRAFT_03138 at 174.954 kb on - strand, within H281DRAFT_03138 at 175.077 kb on + strand, within H281DRAFT_03138 at 175.078 kb on - strand, within H281DRAFT_03138 at 175.078 kb on - strand, within H281DRAFT_03138 at 175.113 kb on - strand, within H281DRAFT_03138 at 175.113 kb on - strand, within H281DRAFT_03138 at 175.117 kb on + strand, within H281DRAFT_03138
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 172,646 + H281DRAFT_03136 0.20 +1.2 172,663 + H281DRAFT_03136 0.22 -2.3 172,664 - H281DRAFT_03136 0.22 -0.5 172,688 - H281DRAFT_03136 0.25 +0.5 172,910 + H281DRAFT_03136 0.53 +0.8 172,911 - H281DRAFT_03136 0.53 -0.5 173,048 + H281DRAFT_03136 0.70 -1.4 173,049 - H281DRAFT_03136 0.70 -0.6 173,192 + H281DRAFT_03136 0.88 +0.3 173,325 + +0.2 173,528 + +1.1 173,529 - -2.4 173,570 + -0.8 173,571 - +0.2 173,577 + +0.6 173,577 + -0.3 173,577 + -1.2 173,578 - -0.6 173,584 + +0.6 173,585 - +0.4 173,585 - -0.3 173,958 + H281DRAFT_03137 0.44 -2.9 173,959 - H281DRAFT_03137 0.44 -1.2 174,159 + H281DRAFT_03137 0.67 +0.2 174,217 - H281DRAFT_03137 0.74 -1.1 174,217 - H281DRAFT_03137 0.74 +1.3 174,441 + +1.6 174,514 + -0.1 174,514 + -3.0 174,514 + -0.6 174,514 + +0.2 174,515 - -0.0 174,710 + +0.6 174,710 + -0.7 174,710 + -2.9 174,710 + +0.8 174,710 + +1.0 174,777 - +1.1 174,777 - +0.7 174,920 + H281DRAFT_03138 0.17 +1.6 174,921 - H281DRAFT_03138 0.17 +2.4 174,954 - H281DRAFT_03138 0.20 +0.2 175,077 + H281DRAFT_03138 0.30 +0.7 175,078 - H281DRAFT_03138 0.30 +0.1 175,078 - H281DRAFT_03138 0.30 -0.4 175,113 - H281DRAFT_03138 0.33 +0.5 175,113 - H281DRAFT_03138 0.33 +0.8 175,117 + H281DRAFT_03138 0.34 -0.1
Or see this region's nucleotide sequence