Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02445 and H281DRAFT_02446 are separated by 210 nucleotides H281DRAFT_02446 and H281DRAFT_02447 are separated by 391 nucleotides
H281DRAFT_02445: H281DRAFT_02445 - cytochrome c peroxidase, at 8,225 to 9,676
_02445
H281DRAFT_02446: H281DRAFT_02446 - phospholipase C, at 9,887 to 11,665
_02446
H281DRAFT_02447: H281DRAFT_02447 - Short-chain dehydrogenase, at 12,057 to 13,073
_02447
Position (kb)
9
10
11
12 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 8.952 kb on + strand, within H281DRAFT_02445 at 8.953 kb on - strand, within H281DRAFT_02445 at 9.234 kb on + strand, within H281DRAFT_02445 at 9.531 kb on + strand at 9.532 kb on - strand at 9.691 kb on + strand at 9.936 kb on + strand at 9.936 kb on + strand at 9.937 kb on - strand at 10.301 kb on - strand, within H281DRAFT_02446 at 10.310 kb on - strand, within H281DRAFT_02446 at 10.311 kb on + strand, within H281DRAFT_02446 at 10.345 kb on - strand, within H281DRAFT_02446 at 10.537 kb on - strand, within H281DRAFT_02446 at 10.959 kb on - strand, within H281DRAFT_02446 at 11.013 kb on + strand, within H281DRAFT_02446 at 11.014 kb on - strand, within H281DRAFT_02446 at 11.095 kb on - strand, within H281DRAFT_02446 at 11.197 kb on - strand, within H281DRAFT_02446 at 11.347 kb on + strand, within H281DRAFT_02446 at 11.463 kb on + strand, within H281DRAFT_02446 at 11.464 kb on - strand, within H281DRAFT_02446 at 11.712 kb on + strand at 11.712 kb on + strand at 11.713 kb on - strand at 11.713 kb on - strand at 11.713 kb on - strand at 11.713 kb on - strand at 11.819 kb on + strand at 11.819 kb on + strand at 11.826 kb on + strand at 11.838 kb on + strand at 11.838 kb on + strand at 11.842 kb on - strand at 11.940 kb on - strand at 11.988 kb on + strand at 12.243 kb on + strand, within H281DRAFT_02447 at 12.354 kb on + strand, within H281DRAFT_02447 at 12.354 kb on + strand, within H281DRAFT_02447 at 12.528 kb on + strand, within H281DRAFT_02447 at 12.528 kb on + strand, within H281DRAFT_02447 at 12.528 kb on + strand, within H281DRAFT_02447 at 12.529 kb on - strand, within H281DRAFT_02447 at 12.550 kb on + strand, within H281DRAFT_02447 at 12.550 kb on + strand, within H281DRAFT_02447 at 12.560 kb on + strand, within H281DRAFT_02447 at 12.638 kb on + strand, within H281DRAFT_02447
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 8,952 + H281DRAFT_02445 0.50 +0.2 8,953 - H281DRAFT_02445 0.50 -0.8 9,234 + H281DRAFT_02445 0.69 -0.8 9,531 + -1.5 9,532 - +0.6 9,691 + -3.1 9,936 + -0.9 9,936 + +0.3 9,937 - +0.9 10,301 - H281DRAFT_02446 0.23 +0.3 10,310 - H281DRAFT_02446 0.24 -0.8 10,311 + H281DRAFT_02446 0.24 -1.7 10,345 - H281DRAFT_02446 0.26 +0.9 10,537 - H281DRAFT_02446 0.37 +0.2 10,959 - H281DRAFT_02446 0.60 +1.1 11,013 + H281DRAFT_02446 0.63 +1.0 11,014 - H281DRAFT_02446 0.63 +1.4 11,095 - H281DRAFT_02446 0.68 +0.9 11,197 - H281DRAFT_02446 0.74 +1.4 11,347 + H281DRAFT_02446 0.82 -0.2 11,463 + H281DRAFT_02446 0.89 -0.2 11,464 - H281DRAFT_02446 0.89 -0.7 11,712 + -0.5 11,712 + -0.7 11,713 - +1.0 11,713 - -1.4 11,713 - -2.1 11,713 - -0.2 11,819 + +0.2 11,819 + -1.3 11,826 + +1.8 11,838 + -0.5 11,838 + +2.0 11,842 - +0.9 11,940 - +0.7 11,988 + -1.1 12,243 + H281DRAFT_02447 0.18 +0.8 12,354 + H281DRAFT_02447 0.29 +1.4 12,354 + H281DRAFT_02447 0.29 -0.5 12,528 + H281DRAFT_02447 0.46 +0.6 12,528 + H281DRAFT_02447 0.46 -0.3 12,528 + H281DRAFT_02447 0.46 -2.2 12,529 - H281DRAFT_02447 0.46 +0.1 12,550 + H281DRAFT_02447 0.48 +2.5 12,550 + H281DRAFT_02447 0.48 +1.1 12,560 + H281DRAFT_02447 0.49 -1.6 12,638 + H281DRAFT_02447 0.57 +0.5
Or see this region's nucleotide sequence