Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02171 and H281DRAFT_02172 are separated by 342 nucleotides H281DRAFT_02172 and H281DRAFT_02173 are separated by 109 nucleotides
H281DRAFT_02171: H281DRAFT_02171 - aldose 1-epimerase, at 310,868 to 311,851
_02171
H281DRAFT_02172: H281DRAFT_02172 - transcriptional regulator, LacI family, at 312,194 to 313,246
_02172
H281DRAFT_02173: H281DRAFT_02173 - monosaccharide ABC transporter substrate-binding protein, CUT2 family, at 313,356 to 314,387
_02173
Position (kb) 312
313
314 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 311.250 kb on + strand, within H281DRAFT_02171 at 311.251 kb on - strand, within H281DRAFT_02171 at 311.280 kb on + strand, within H281DRAFT_02171 at 311.280 kb on + strand, within H281DRAFT_02171 at 311.281 kb on - strand, within H281DRAFT_02171 at 311.411 kb on - strand, within H281DRAFT_02171 at 311.547 kb on - strand, within H281DRAFT_02171 at 311.547 kb on - strand, within H281DRAFT_02171 at 311.592 kb on + strand, within H281DRAFT_02171 at 311.697 kb on + strand, within H281DRAFT_02171 at 311.895 kb on + strand at 311.923 kb on + strand at 311.924 kb on - strand at 311.924 kb on - strand at 312.093 kb on - strand at 312.093 kb on - strand at 312.093 kb on - strand at 312.572 kb on + strand, within H281DRAFT_02172 at 312.573 kb on - strand, within H281DRAFT_02172 at 312.573 kb on - strand, within H281DRAFT_02172 at 312.635 kb on + strand, within H281DRAFT_02172 at 312.636 kb on - strand, within H281DRAFT_02172 at 312.704 kb on + strand, within H281DRAFT_02172 at 312.705 kb on - strand, within H281DRAFT_02172 at 312.737 kb on + strand, within H281DRAFT_02172 at 312.737 kb on + strand, within H281DRAFT_02172 at 312.737 kb on + strand, within H281DRAFT_02172 at 312.739 kb on + strand, within H281DRAFT_02172 at 312.739 kb on + strand, within H281DRAFT_02172 at 313.073 kb on + strand, within H281DRAFT_02172 at 313.074 kb on - strand, within H281DRAFT_02172 at 313.074 kb on - strand, within H281DRAFT_02172 at 313.204 kb on + strand at 313.255 kb on - strand at 313.270 kb on - strand at 313.270 kb on - strand at 313.328 kb on + strand at 313.329 kb on - strand at 313.784 kb on + strand, within H281DRAFT_02173 at 313.784 kb on + strand, within H281DRAFT_02173 at 313.821 kb on + strand, within H281DRAFT_02173 at 313.821 kb on + strand, within H281DRAFT_02173 at 313.822 kb on - strand, within H281DRAFT_02173
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 311,250 + H281DRAFT_02171 0.39 +0.1 311,251 - H281DRAFT_02171 0.39 -1.8 311,280 + H281DRAFT_02171 0.42 +0.8 311,280 + H281DRAFT_02171 0.42 +0.3 311,281 - H281DRAFT_02171 0.42 -0.2 311,411 - H281DRAFT_02171 0.55 +1.0 311,547 - H281DRAFT_02171 0.69 -0.2 311,547 - H281DRAFT_02171 0.69 +1.4 311,592 + H281DRAFT_02171 0.74 +0.1 311,697 + H281DRAFT_02171 0.84 +0.0 311,895 + +0.1 311,923 + -1.0 311,924 - +2.5 311,924 - +0.5 312,093 - +1.5 312,093 - +0.2 312,093 - +0.2 312,572 + H281DRAFT_02172 0.36 -0.5 312,573 - H281DRAFT_02172 0.36 -1.3 312,573 - H281DRAFT_02172 0.36 -1.9 312,635 + H281DRAFT_02172 0.42 +2.8 312,636 - H281DRAFT_02172 0.42 +0.3 312,704 + H281DRAFT_02172 0.48 -0.2 312,705 - H281DRAFT_02172 0.49 +0.1 312,737 + H281DRAFT_02172 0.52 -1.5 312,737 + H281DRAFT_02172 0.52 -2.0 312,737 + H281DRAFT_02172 0.52 -0.5 312,739 + H281DRAFT_02172 0.52 +0.4 312,739 + H281DRAFT_02172 0.52 +0.7 313,073 + H281DRAFT_02172 0.83 -1.2 313,074 - H281DRAFT_02172 0.84 -0.3 313,074 - H281DRAFT_02172 0.84 +2.7 313,204 + -0.3 313,255 - -0.1 313,270 - +1.0 313,270 - +3.6 313,328 + +1.2 313,329 - +1.0 313,784 + H281DRAFT_02173 0.41 +0.6 313,784 + H281DRAFT_02173 0.41 -0.4 313,821 + H281DRAFT_02173 0.45 +0.1 313,821 + H281DRAFT_02173 0.45 -1.5 313,822 - H281DRAFT_02173 0.45 +0.6
Or see this region's nucleotide sequence