Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01628 and H281DRAFT_01629 are separated by 75 nucleotides H281DRAFT_01629 and H281DRAFT_01630 are separated by 268 nucleotides
H281DRAFT_01628: H281DRAFT_01628 - putative spermidine/putrescine transport system ATP-binding protein, at 507,064 to 508,143
_01628
H281DRAFT_01629: H281DRAFT_01629 - putative spermidine/putrescine transport system substrate-binding protein, at 508,219 to 509,388
_01629
H281DRAFT_01630: H281DRAFT_01630 - gluconolactonase, at 509,657 to 510,601
_01630
Position (kb) 508
509
510 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 507.452 kb on + strand, within H281DRAFT_01628 at 507.453 kb on - strand, within H281DRAFT_01628 at 507.453 kb on - strand, within H281DRAFT_01628 at 507.866 kb on + strand, within H281DRAFT_01628 at 507.866 kb on + strand, within H281DRAFT_01628 at 508.221 kb on - strand at 508.421 kb on + strand, within H281DRAFT_01629 at 508.481 kb on + strand, within H281DRAFT_01629 at 508.529 kb on + strand, within H281DRAFT_01629 at 508.529 kb on + strand, within H281DRAFT_01629 at 508.530 kb on - strand, within H281DRAFT_01629 at 508.841 kb on + strand, within H281DRAFT_01629 at 508.842 kb on - strand, within H281DRAFT_01629 at 508.950 kb on + strand, within H281DRAFT_01629 at 508.952 kb on + strand, within H281DRAFT_01629 at 508.953 kb on - strand, within H281DRAFT_01629 at 508.970 kb on + strand, within H281DRAFT_01629 at 509.013 kb on - strand, within H281DRAFT_01629 at 509.013 kb on - strand, within H281DRAFT_01629 at 509.114 kb on - strand, within H281DRAFT_01629 at 509.123 kb on - strand, within H281DRAFT_01629 at 509.123 kb on - strand, within H281DRAFT_01629 at 509.148 kb on + strand, within H281DRAFT_01629 at 509.192 kb on + strand, within H281DRAFT_01629 at 509.347 kb on + strand at 509.348 kb on - strand at 509.348 kb on - strand at 509.409 kb on + strand at 509.495 kb on + strand at 509.625 kb on + strand at 509.688 kb on + strand at 509.689 kb on - strand at 509.782 kb on + strand, within H281DRAFT_01630 at 509.782 kb on + strand, within H281DRAFT_01630 at 509.809 kb on + strand, within H281DRAFT_01630 at 509.809 kb on + strand, within H281DRAFT_01630 at 509.809 kb on + strand, within H281DRAFT_01630 at 509.809 kb on + strand, within H281DRAFT_01630 at 509.810 kb on - strand, within H281DRAFT_01630 at 509.810 kb on - strand, within H281DRAFT_01630 at 509.810 kb on - strand, within H281DRAFT_01630 at 509.810 kb on - strand, within H281DRAFT_01630 at 510.012 kb on + strand, within H281DRAFT_01630 at 510.012 kb on + strand, within H281DRAFT_01630 at 510.013 kb on - strand, within H281DRAFT_01630 at 510.013 kb on - strand, within H281DRAFT_01630 at 510.013 kb on - strand, within H281DRAFT_01630 at 510.013 kb on - strand, within H281DRAFT_01630 at 510.151 kb on - strand, within H281DRAFT_01630 at 510.151 kb on - strand, within H281DRAFT_01630 at 510.346 kb on + strand, within H281DRAFT_01630
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 507,452 + H281DRAFT_01628 0.36 +0.1 507,453 - H281DRAFT_01628 0.36 -0.2 507,453 - H281DRAFT_01628 0.36 +0.3 507,866 + H281DRAFT_01628 0.74 -0.4 507,866 + H281DRAFT_01628 0.74 -2.4 508,221 - +0.2 508,421 + H281DRAFT_01629 0.17 -0.8 508,481 + H281DRAFT_01629 0.22 +1.7 508,529 + H281DRAFT_01629 0.26 +0.6 508,529 + H281DRAFT_01629 0.26 -0.5 508,530 - H281DRAFT_01629 0.27 -0.0 508,841 + H281DRAFT_01629 0.53 -0.5 508,842 - H281DRAFT_01629 0.53 -1.9 508,950 + H281DRAFT_01629 0.62 +0.7 508,952 + H281DRAFT_01629 0.63 +0.2 508,953 - H281DRAFT_01629 0.63 +1.0 508,970 + H281DRAFT_01629 0.64 -0.0 509,013 - H281DRAFT_01629 0.68 +0.1 509,013 - H281DRAFT_01629 0.68 -2.4 509,114 - H281DRAFT_01629 0.76 +0.3 509,123 - H281DRAFT_01629 0.77 -0.5 509,123 - H281DRAFT_01629 0.77 -1.6 509,148 + H281DRAFT_01629 0.79 +0.5 509,192 + H281DRAFT_01629 0.83 -0.3 509,347 + +0.5 509,348 - +3.1 509,348 - +0.3 509,409 + -1.2 509,495 + -1.0 509,625 + -0.6 509,688 + +0.4 509,689 - -1.1 509,782 + H281DRAFT_01630 0.13 -2.6 509,782 + H281DRAFT_01630 0.13 +0.7 509,809 + H281DRAFT_01630 0.16 -1.7 509,809 + H281DRAFT_01630 0.16 -0.3 509,809 + H281DRAFT_01630 0.16 +0.1 509,809 + H281DRAFT_01630 0.16 -0.4 509,810 - H281DRAFT_01630 0.16 -0.9 509,810 - H281DRAFT_01630 0.16 -1.0 509,810 - H281DRAFT_01630 0.16 -1.9 509,810 - H281DRAFT_01630 0.16 -0.7 510,012 + H281DRAFT_01630 0.38 -0.6 510,012 + H281DRAFT_01630 0.38 -1.0 510,013 - H281DRAFT_01630 0.38 +1.9 510,013 - H281DRAFT_01630 0.38 +0.2 510,013 - H281DRAFT_01630 0.38 -0.7 510,013 - H281DRAFT_01630 0.38 +0.1 510,151 - H281DRAFT_01630 0.52 +0.3 510,151 - H281DRAFT_01630 0.52 +0.3 510,346 + H281DRAFT_01630 0.73 -0.0
Or see this region's nucleotide sequence