Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01391 and H281DRAFT_01392 overlap by 4 nucleotides H281DRAFT_01392 and H281DRAFT_01393 are separated by 16 nucleotides H281DRAFT_01393 and H281DRAFT_01394 overlap by 4 nucleotides
H281DRAFT_01391: H281DRAFT_01391 - two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ, at 244,155 to 245,549
_01391
H281DRAFT_01392: H281DRAFT_01392 - two component transcriptional regulator, winged helix family, at 245,546 to 246,259
_01392
H281DRAFT_01393: H281DRAFT_01393 - hydrophobic/amphiphilic exporter-1, HAE1 family, at 246,276 to 249,407
_01393
H281DRAFT_01394: H281DRAFT_01394 - RND family efflux transporter, MFP subunit, at 249,404 to 250,612
_01394
Position (kb) 246
247
248
249
250 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 245.384 kb on - strand, within H281DRAFT_01391 at 245.574 kb on + strand at 245.956 kb on - strand, within H281DRAFT_01392 at 246.337 kb on + strand at 246.615 kb on + strand, within H281DRAFT_01393 at 246.841 kb on + strand, within H281DRAFT_01393 at 247.022 kb on + strand, within H281DRAFT_01393 at 247.022 kb on + strand, within H281DRAFT_01393 at 247.022 kb on + strand, within H281DRAFT_01393 at 247.022 kb on + strand, within H281DRAFT_01393 at 247.023 kb on - strand, within H281DRAFT_01393 at 247.472 kb on - strand, within H281DRAFT_01393 at 248.248 kb on + strand, within H281DRAFT_01393 at 248.249 kb on - strand, within H281DRAFT_01393 at 248.378 kb on - strand, within H281DRAFT_01393 at 248.797 kb on - strand, within H281DRAFT_01393 at 248.962 kb on + strand, within H281DRAFT_01393 at 248.990 kb on - strand, within H281DRAFT_01393 at 249.379 kb on - strand at 250.007 kb on + strand, within H281DRAFT_01394 at 250.008 kb on - strand, within H281DRAFT_01394 at 250.191 kb on + strand, within H281DRAFT_01394 at 250.232 kb on + strand, within H281DRAFT_01394
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 245,384 - H281DRAFT_01391 0.88 -0.1 245,574 + -2.9 245,956 - H281DRAFT_01392 0.57 +1.3 246,337 + +0.2 246,615 + H281DRAFT_01393 0.11 +0.5 246,841 + H281DRAFT_01393 0.18 -0.8 247,022 + H281DRAFT_01393 0.24 +0.5 247,022 + H281DRAFT_01393 0.24 -0.9 247,022 + H281DRAFT_01393 0.24 +0.7 247,022 + H281DRAFT_01393 0.24 +0.5 247,023 - H281DRAFT_01393 0.24 +1.0 247,472 - H281DRAFT_01393 0.38 +0.3 248,248 + H281DRAFT_01393 0.63 -0.3 248,249 - H281DRAFT_01393 0.63 -0.9 248,378 - H281DRAFT_01393 0.67 +0.2 248,797 - H281DRAFT_01393 0.80 -2.3 248,962 + H281DRAFT_01393 0.86 -1.0 248,990 - H281DRAFT_01393 0.87 -0.2 249,379 - -2.6 250,007 + H281DRAFT_01394 0.50 -0.8 250,008 - H281DRAFT_01394 0.50 -0.1 250,191 + H281DRAFT_01394 0.65 -0.3 250,232 + H281DRAFT_01394 0.68 +0.7
Or see this region's nucleotide sequence