Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01141 and H281DRAFT_01142 overlap by 4 nucleotides H281DRAFT_01142 and H281DRAFT_01143 overlap by 8 nucleotides H281DRAFT_01143 and H281DRAFT_01144 are separated by 325 nucleotides
H281DRAFT_01141: H281DRAFT_01141 - xanthine dehydrogenase, molybdenum binding subunit apoprotein, at 1,287,592 to 1,290,654
_01141
H281DRAFT_01142: H281DRAFT_01142 - 2,5-furandicarboxylate decarboxylase 2, at 1,290,651 to 1,291,307
_01142
H281DRAFT_01143: H281DRAFT_01143 - 2,5-furandicarboxylate decarboxylase 1, at 1,291,300 to 1,292,784
_01143
H281DRAFT_01144: H281DRAFT_01144 - transcriptional regulator, LysR family, at 1,293,110 to 1,294,033
_01144
Position (kb) 1291
1292
1293 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 1291.069 kb on + strand, within H281DRAFT_01142 at 1291.088 kb on + strand, within H281DRAFT_01142 at 1291.323 kb on - strand at 1291.472 kb on + strand, within H281DRAFT_01143 at 1291.653 kb on - strand, within H281DRAFT_01143 at 1291.653 kb on - strand, within H281DRAFT_01143 at 1292.023 kb on + strand, within H281DRAFT_01143 at 1292.029 kb on + strand, within H281DRAFT_01143 at 1292.030 kb on - strand, within H281DRAFT_01143 at 1292.030 kb on - strand, within H281DRAFT_01143 at 1292.364 kb on + strand, within H281DRAFT_01143 at 1292.403 kb on + strand, within H281DRAFT_01143 at 1292.404 kb on - strand, within H281DRAFT_01143 at 1292.407 kb on + strand, within H281DRAFT_01143 at 1292.408 kb on - strand, within H281DRAFT_01143 at 1292.778 kb on + strand at 1292.931 kb on - strand at 1292.999 kb on + strand at 1293.000 kb on - strand at 1293.000 kb on - strand at 1293.081 kb on - strand at 1293.302 kb on + strand, within H281DRAFT_01144
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 1,291,069 + H281DRAFT_01142 0.64 +0.9 1,291,088 + H281DRAFT_01142 0.67 +0.2 1,291,323 - -0.1 1,291,472 + H281DRAFT_01143 0.12 -0.2 1,291,653 - H281DRAFT_01143 0.24 +0.5 1,291,653 - H281DRAFT_01143 0.24 -0.7 1,292,023 + H281DRAFT_01143 0.49 -0.9 1,292,029 + H281DRAFT_01143 0.49 -1.0 1,292,030 - H281DRAFT_01143 0.49 -0.7 1,292,030 - H281DRAFT_01143 0.49 +0.1 1,292,364 + H281DRAFT_01143 0.72 +1.1 1,292,403 + H281DRAFT_01143 0.74 -3.8 1,292,404 - H281DRAFT_01143 0.74 -1.9 1,292,407 + H281DRAFT_01143 0.75 +0.4 1,292,408 - H281DRAFT_01143 0.75 -0.7 1,292,778 + -1.1 1,292,931 - +0.1 1,292,999 + -0.5 1,293,000 - +0.5 1,293,000 - +1.4 1,293,081 - -1.0 1,293,302 + H281DRAFT_01144 0.21 -0.4
Or see this region's nucleotide sequence