Experiment: Bu1_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00874 and H281DRAFT_00875 are separated by 99 nucleotides H281DRAFT_00875 and H281DRAFT_00876 are separated by 50 nucleotides H281DRAFT_00876 and H281DRAFT_00877 are separated by 142 nucleotides H281DRAFT_00877 and H281DRAFT_00878 are separated by 98 nucleotides
H281DRAFT_00874: H281DRAFT_00874 - Bacteriophytochrome (light-regulated signal transduction histidine kinase), at 966,829 to 968,439
_00874
H281DRAFT_00875: H281DRAFT_00875 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 968,539 to 969,042
_00875
H281DRAFT_00876: H281DRAFT_00876 - PAS/PAC sensor hybrid histidine kinase (EC 2.7.13.3), at 969,093 to 971,066
_00876
H281DRAFT_00877: H281DRAFT_00877 - large conductance mechanosensitive channel, at 971,209 to 971,655
_00877
H281DRAFT_00878: H281DRAFT_00878 - threonine dehydratase, at 971,754 to 972,788
_00878
Position (kb) 969
970
971
972 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 968.215 kb on + strand, within H281DRAFT_00874 at 968.216 kb on - strand, within H281DRAFT_00874 at 968.216 kb on - strand, within H281DRAFT_00874 at 968.216 kb on - strand, within H281DRAFT_00874 at 968.218 kb on + strand, within H281DRAFT_00874 at 968.219 kb on - strand, within H281DRAFT_00874 at 968.255 kb on - strand, within H281DRAFT_00874 at 968.255 kb on - strand, within H281DRAFT_00874 at 968.300 kb on + strand at 968.300 kb on + strand at 968.498 kb on - strand at 968.498 kb on - strand at 968.538 kb on + strand at 968.539 kb on - strand at 968.774 kb on + strand, within H281DRAFT_00875 at 968.775 kb on - strand, within H281DRAFT_00875 at 968.908 kb on + strand, within H281DRAFT_00875 at 968.909 kb on - strand, within H281DRAFT_00875 at 968.930 kb on - strand, within H281DRAFT_00875 at 968.934 kb on + strand, within H281DRAFT_00875 at 968.935 kb on - strand, within H281DRAFT_00875 at 968.961 kb on + strand, within H281DRAFT_00875 at 968.972 kb on + strand, within H281DRAFT_00875 at 969.061 kb on + strand at 969.061 kb on + strand at 969.061 kb on + strand at 969.062 kb on - strand at 969.074 kb on + strand at 969.075 kb on - strand at 969.276 kb on + strand at 969.277 kb on - strand at 969.448 kb on - strand, within H281DRAFT_00876 at 969.540 kb on + strand, within H281DRAFT_00876 at 969.624 kb on + strand, within H281DRAFT_00876 at 969.624 kb on + strand, within H281DRAFT_00876 at 969.624 kb on + strand, within H281DRAFT_00876 at 969.625 kb on - strand, within H281DRAFT_00876 at 969.722 kb on - strand, within H281DRAFT_00876 at 969.751 kb on - strand, within H281DRAFT_00876 at 969.769 kb on + strand, within H281DRAFT_00876 at 970.019 kb on - strand, within H281DRAFT_00876 at 970.205 kb on - strand, within H281DRAFT_00876 at 970.287 kb on + strand, within H281DRAFT_00876 at 970.288 kb on - strand, within H281DRAFT_00876 at 970.288 kb on - strand, within H281DRAFT_00876 at 970.288 kb on - strand, within H281DRAFT_00876 at 970.288 kb on - strand at 970.325 kb on - strand, within H281DRAFT_00876 at 970.377 kb on + strand, within H281DRAFT_00876 at 970.377 kb on + strand, within H281DRAFT_00876 at 970.378 kb on - strand, within H281DRAFT_00876 at 970.558 kb on + strand, within H281DRAFT_00876 at 970.558 kb on + strand, within H281DRAFT_00876 at 970.559 kb on - strand, within H281DRAFT_00876 at 970.559 kb on - strand, within H281DRAFT_00876 at 970.559 kb on - strand, within H281DRAFT_00876 at 970.838 kb on + strand, within H281DRAFT_00876 at 970.890 kb on + strand at 970.951 kb on + strand at 970.951 kb on + strand at 970.951 kb on + strand at 970.952 kb on - strand at 970.952 kb on - strand at 970.952 kb on - strand at 971.064 kb on + strand at 971.064 kb on + strand at 971.167 kb on + strand at 971.171 kb on - strand at 971.368 kb on - strand, within H281DRAFT_00877 at 971.431 kb on - strand, within H281DRAFT_00877 at 971.619 kb on + strand at 971.690 kb on - strand at 971.706 kb on + strand at 971.706 kb on + strand at 971.755 kb on + strand at 971.884 kb on - strand, within H281DRAFT_00878 at 972.019 kb on + strand, within H281DRAFT_00878 at 972.019 kb on + strand, within H281DRAFT_00878 at 972.020 kb on - strand, within H281DRAFT_00878 at 972.020 kb on - strand, within H281DRAFT_00878 at 972.020 kb on - strand, within H281DRAFT_00878
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_100 remove 968,215 + H281DRAFT_00874 0.86 -0.5 968,216 - H281DRAFT_00874 0.86 +0.1 968,216 - H281DRAFT_00874 0.86 +0.5 968,216 - H281DRAFT_00874 0.86 +0.1 968,218 + H281DRAFT_00874 0.86 -0.2 968,219 - H281DRAFT_00874 0.86 +0.2 968,255 - H281DRAFT_00874 0.89 -0.1 968,255 - H281DRAFT_00874 0.89 -1.0 968,300 + -0.8 968,300 + +1.2 968,498 - -2.3 968,498 - -0.8 968,538 + -0.1 968,539 - +0.2 968,774 + H281DRAFT_00875 0.47 +2.0 968,775 - H281DRAFT_00875 0.47 +0.0 968,908 + H281DRAFT_00875 0.73 -0.3 968,909 - H281DRAFT_00875 0.73 -0.9 968,930 - H281DRAFT_00875 0.78 -1.6 968,934 + H281DRAFT_00875 0.78 -0.0 968,935 - H281DRAFT_00875 0.79 +4.1 968,961 + H281DRAFT_00875 0.84 -0.8 968,972 + H281DRAFT_00875 0.86 +1.7 969,061 + -0.6 969,061 + +0.4 969,061 + +0.2 969,062 - -0.7 969,074 + -2.3 969,075 - -0.2 969,276 + +1.1 969,277 - +0.5 969,448 - H281DRAFT_00876 0.18 -0.5 969,540 + H281DRAFT_00876 0.23 +0.8 969,624 + H281DRAFT_00876 0.27 +0.3 969,624 + H281DRAFT_00876 0.27 +0.5 969,624 + H281DRAFT_00876 0.27 -1.4 969,625 - H281DRAFT_00876 0.27 +0.3 969,722 - H281DRAFT_00876 0.32 +0.1 969,751 - H281DRAFT_00876 0.33 -0.6 969,769 + H281DRAFT_00876 0.34 +1.1 970,019 - H281DRAFT_00876 0.47 -0.5 970,205 - H281DRAFT_00876 0.56 +1.4 970,287 + H281DRAFT_00876 0.60 -0.6 970,288 - H281DRAFT_00876 0.61 +0.7 970,288 - H281DRAFT_00876 0.61 -0.7 970,288 - H281DRAFT_00876 0.61 +0.2 970,288 - +2.7 970,325 - H281DRAFT_00876 0.62 +1.7 970,377 + H281DRAFT_00876 0.65 -0.2 970,377 + H281DRAFT_00876 0.65 -0.8 970,378 - H281DRAFT_00876 0.65 +2.5 970,558 + H281DRAFT_00876 0.74 +0.4 970,558 + H281DRAFT_00876 0.74 +0.3 970,559 - H281DRAFT_00876 0.74 +0.6 970,559 - H281DRAFT_00876 0.74 -0.1 970,559 - H281DRAFT_00876 0.74 -0.9 970,838 + H281DRAFT_00876 0.88 -1.6 970,890 + +0.2 970,951 + -0.9 970,951 + +1.2 970,951 + +0.0 970,952 - -0.2 970,952 - +1.2 970,952 - +0.3 971,064 + +0.4 971,064 + +0.4 971,167 + -0.2 971,171 - -1.7 971,368 - H281DRAFT_00877 0.36 -0.5 971,431 - H281DRAFT_00877 0.50 -1.7 971,619 + -0.6 971,690 - -0.7 971,706 + +0.0 971,706 + -0.3 971,755 + +0.9 971,884 - H281DRAFT_00878 0.13 +1.6 972,019 + H281DRAFT_00878 0.26 +0.4 972,019 + H281DRAFT_00878 0.26 -1.1 972,020 - H281DRAFT_00878 0.26 +0.4 972,020 - H281DRAFT_00878 0.26 +0.3 972,020 - H281DRAFT_00878 0.26 -0.4
Or see this region's nucleotide sequence