Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1502

Experiment: BHIS with Dimethyl Sulfoxide 0.2 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 0.2 vol%
1,851,150	+		BT1501	0.58	-2.1
1,851,150	+		BT1501	0.58	+1.3
1,851,303	+		BT1501	0.72	-2.9
1,851,307	+		BT1501	0.73	-2.1
1,851,430	+		BT1501	0.84	-1.3
1,851,473	+		BT1501	0.88	-2.5
1,851,557	+				+1.3
1,851,558	-				-1.5
1,851,573	-				-1.0
1,851,574	+				-1.7
1,851,595	+				-0.3
1,851,604	+				+1.3
1,851,612	+				-0.5
1,851,643	+				+0.3
1,851,662	-				-1.3
1,851,663	+				+0.3
1,851,719	+				-1.7
1,851,733	-				-1.0
1,851,753	+				-0.5
1,851,801	+				-0.1
1,851,802	-				+2.6
1,851,807	+				-2.3
1,851,807	+				-1.1
1,851,808	-				+0.3
1,851,846	+				+1.3
1,851,858	+				-3.2
1,851,946	-				+0.9
1,851,948	+				-1.6
1,851,949	-				-1.3
1,851,949	-				+0.3
1,851,954	+				+0.1
1,851,955	-				-2.7
1,851,963	+				-0.7
1,852,003	+		BT1502	0.11	-2.3
1,852,004	-		BT1502	0.11	-1.3
1,852,059	+		BT1502	0.13	+0.9
1,852,060	-		BT1502	0.13	+1.3
1,852,115	-		BT1502	0.15	-0.7
1,852,162	-		BT1502	0.17	+0.3
1,852,171	+		BT1502	0.17	-1.7
1,852,171	+		BT1502	0.17	+0.3
1,852,214	+		BT1502	0.19	-1.1
1,852,294	+		BT1502	0.22	-2.1
1,852,344	+		BT1502	0.23	+1.9
1,852,379	-		BT1502	0.25	+1.0
1,852,383	+		BT1502	0.25	-1.1
1,852,383	+		BT1502	0.25	-0.3
1,852,384	-		BT1502	0.25	+0.1
1,852,420	+		BT1502	0.26	+0.3
1,852,442	+		BT1502	0.27	-0.2
1,852,443	-		BT1502	0.27	-0.3
1,852,455	+		BT1502	0.27	-0.9
1,852,456	-		BT1502	0.27	-1.7
1,852,470	+		BT1502	0.28	-0.3
1,852,633	-		BT1502	0.34	+0.3
1,852,771	-		BT1502	0.38	+0.3
1,852,842	+		BT1502	0.41	+1.3
1,852,845	-		BT1502	0.41	-1.7
1,852,866	-		BT1502	0.42	-0.7
1,852,866	-		BT1502	0.42	+0.3
1,852,866	-		BT1502	0.42	-2.7
1,852,869	+		BT1502	0.42	+0.1
1,852,885	-		BT1502	0.42	-0.7
1,852,886	+		BT1502	0.42	-1.3
1,852,887	-		BT1502	0.42	+0.3
1,852,906	-		BT1502	0.43	+0.9
1,853,010	+		BT1502	0.47	-1.3
1,853,055	+		BT1502	0.48	-0.3
1,853,056	-		BT1502	0.48	+0.9
1,853,089	+		BT1502	0.50	-1.3
1,853,107	+		BT1502	0.50	-0.7
1,853,108	-		BT1502	0.50	-1.7
1,853,124	+		BT1502	0.51	-1.3
1,853,125	-		BT1502	0.51	-0.7
1,853,125	-		BT1502	0.51	-0.7
1,853,202	+		BT1502	0.54	-1.2
1,853,211	+				+0.3
1,853,286	+		BT1502	0.57	-0.1
1,853,306	+		BT1502	0.57	-0.7
1,853,306	+		BT1502	0.57	+0.9
1,853,306	+		BT1502	0.57	-0.7
1,853,306	+		BT1502	0.57	-2.7
1,853,354	+		BT1502	0.59	-0.4
1,853,385	+		BT1502	0.60	-0.7
1,853,385	+		BT1502	0.60	+0.3
1,853,417	+		BT1502	0.61	+0.9
1,853,480	+		BT1502	0.63	-1.6
1,853,493	-		BT1502	0.64	+1.1
1,853,496	+		BT1502	0.64	+0.3
1,853,503	-		BT1502	0.64	+0.9
1,853,514	+		BT1502	0.65	-0.5
1,853,524	-		BT1502	0.65	-0.7
1,853,540	-		BT1502	0.65	+0.3
1,853,595	+		BT1502	0.67	+0.3
1,853,599	-		BT1502	0.68	-0.7
1,853,685	+		BT1502	0.71	-2.5
1,853,685	+		BT1502	0.71	-0.5
1,853,687	+		BT1502	0.71	+0.2
1,853,687	+		BT1502	0.71	-0.1
1,853,687	+		BT1502	0.71	+0.3
1,853,757	-		BT1502	0.73	-0.7
1,853,759	+		BT1502	0.73	+0.3
1,853,759	+		BT1502	0.73	-0.8
1,853,760	-		BT1502	0.73	-2.3
1,853,968	-		BT1502	0.81	-2.7
1,853,968	-		BT1502	0.81	-0.5
1,854,005	+		BT1502	0.82	-1.3
1,854,005	+		BT1502	0.82	-1.3
1,854,010	+		BT1502	0.82	-0.5
1,854,055	-		BT1502	0.84	-2.3
1,854,055	-		BT1502	0.84	+0.0
1,854,055	-		BT1502	0.84	-0.5
1,854,058	+		BT1502	0.84	-0.7
1,854,058	+		BT1502	0.84	-0.3
1,854,172	-		BT1502	0.88	-4.3
1,854,184	-		BT1502	0.88	-2.1
1,854,205	-				-1.3
1,854,205	-		BT1502	0.89	+0.9
1,854,210	+		BT1502	0.89	-1.0
1,854,210	+		BT1502	0.89	+0.7
1,854,217	-		BT1502	0.89	-2.1
1,854,252	+				-0.6
1,854,445	-				+1.3
1,854,445	-				-0.1
1,854,454	-				-1.3
1,854,454	-				-1.7
1,854,714	+				-1.3
1,854,768	-				-2.3
1,854,775	-				-1.5
1,854,792	-				-0.1
1,854,838	+				-2.0
1,854,842	+				+0.9
1,854,914	-				+0.3
1,854,914	-				-1.5
1,855,138	-		BT1503	0.12	-1.3
1,855,175	+		BT1503	0.16	-1.1
1,855,175	+		BT1503	0.16	-0.8
1,855,195	-		BT1503	0.18	-0.7
1,855,209	-		BT1503	0.19	-0.6
1,855,344	-		BT1503	0.33	+0.3
1,855,356	+		BT1503	0.34	-0.4
1,855,382	-		BT1503	0.37	+0.3
1,855,384	-		BT1503	0.37	-0.7
1,855,384	-		BT1503	0.37	-0.7