Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1501

Experiment: BHIS with Dimethyl Sulfoxide 0.2 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 0.2 vol%
1,850,159	-				+0.6
1,850,179	+				-0.1
1,850,227	-				-3.3
1,850,274	+				-1.7
1,850,344	-				-1.7
1,850,344	-				+0.4
1,850,360	-				+0.3
1,850,360	-				+0.3
1,850,362	+				-0.3
1,850,363	-				-0.1
1,850,425	+				-0.4
1,850,428	-				-1.2
1,850,428	-				-2.3
1,850,435	-				-0.1
1,850,494	+				-1.3
1,850,524	+				-0.6
1,850,530	+				+2.3
1,850,557	+				-2.3
1,850,557	+				+0.3
1,850,558	-				-2.1
1,850,558	-				-0.7
1,850,559	+				-0.7
1,850,559	+				-0.5
1,850,583	+				-0.1
1,850,612	-				-2.3
1,851,150	+		BT1501	0.58	-2.1
1,851,150	+		BT1501	0.58	+1.3
1,851,303	+		BT1501	0.72	-2.9
1,851,307	+		BT1501	0.73	-2.1
1,851,430	+		BT1501	0.84	-1.3
1,851,473	+		BT1501	0.88	-2.5
1,851,557	+				+1.3
1,851,558	-				-1.5
1,851,573	-				-1.0
1,851,574	+				-1.7
1,851,595	+				-0.3
1,851,604	+				+1.3
1,851,612	+				-0.5
1,851,643	+				+0.3
1,851,662	-				-1.3
1,851,663	+				+0.3
1,851,719	+				-1.7
1,851,733	-				-1.0
1,851,753	+				-0.5
1,851,801	+				-0.1
1,851,802	-				+2.6
1,851,807	+				-2.3
1,851,807	+				-1.1
1,851,808	-				+0.3
1,851,846	+				+1.3
1,851,858	+				-3.2
1,851,946	-				+0.9
1,851,948	+				-1.6
1,851,949	-				-1.3
1,851,949	-				+0.3
1,851,954	+				+0.1
1,851,955	-				-2.7
1,851,963	+				-0.7
1,852,003	+		BT1502	0.11	-2.3
1,852,004	-		BT1502	0.11	-1.3
1,852,059	+		BT1502	0.13	+0.9
1,852,060	-		BT1502	0.13	+1.3
1,852,115	-		BT1502	0.15	-0.7
1,852,162	-		BT1502	0.17	+0.3
1,852,171	+		BT1502	0.17	-1.7
1,852,171	+		BT1502	0.17	+0.3
1,852,214	+		BT1502	0.19	-1.1
1,852,294	+		BT1502	0.22	-2.1
1,852,344	+		BT1502	0.23	+1.9
1,852,379	-		BT1502	0.25	+1.0
1,852,383	+		BT1502	0.25	-1.1
1,852,383	+		BT1502	0.25	-0.3
1,852,384	-		BT1502	0.25	+0.1
1,852,420	+		BT1502	0.26	+0.3
1,852,442	+		BT1502	0.27	-0.2
1,852,443	-		BT1502	0.27	-0.3
1,852,455	+		BT1502	0.27	-0.9
1,852,456	-		BT1502	0.27	-1.7
1,852,470	+		BT1502	0.28	-0.3