Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2487

Experiment: Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1
2,567,621	+		Synpcc7942_2486	0.57	+0.7
2,567,621	+		Synpcc7942_2486	0.57	+4.5
2,567,629	-		Synpcc7942_2486	0.57	-0.0
2,567,629	-		Synpcc7942_2486	0.57	+1.8
2,567,713	+		Synpcc7942_2486	0.62	+4.6
2,567,770	+		Synpcc7942_2486	0.66	-3.5
2,567,770	+		Synpcc7942_2486	0.66	+4.2
2,567,778	-		Synpcc7942_2486	0.67	+5.1
2,567,778	-		Synpcc7942_2486	0.67	+1.6
2,567,778	-		Synpcc7942_2486	0.67	+1.7
2,567,791	+		Synpcc7942_2486	0.67	+2.8
2,567,815	-		Synpcc7942_2486	0.69	+4.8
2,567,850	-		Synpcc7942_2486	0.71	+3.3
2,567,861	+		Synpcc7942_2486	0.72	+1.2
2,567,921	-		Synpcc7942_2486	0.76	+1.6
2,567,926	-		Synpcc7942_2486	0.76	+4.2
2,567,970	-		Synpcc7942_2486	0.79	+3.0
2,567,988	+		Synpcc7942_2486	0.80	+1.0
2,567,988	+		Synpcc7942_2486	0.80	+4.0
2,567,988	+		Synpcc7942_2486	0.80	-1.2
2,567,998	+		Synpcc7942_2486	0.81	-1.0
2,567,998	+		Synpcc7942_2486	0.81	+0.3
2,567,998	+		Synpcc7942_2486	0.81	+4.7
2,567,998	+		Synpcc7942_2486	0.81	+0.4
2,567,998	+		Synpcc7942_2486	0.81	+5.0
2,568,006	-		Synpcc7942_2486	0.81	-0.0
2,568,006	-		Synpcc7942_2486	0.81	+0.7
2,568,006	-		Synpcc7942_2486	0.81	+6.3
2,568,006	-		Synpcc7942_2486	0.81	+3.0
2,568,046	-		Synpcc7942_2486	0.84	+3.8
2,568,070	-		Synpcc7942_2486	0.85	+3.8
2,568,103	-		Synpcc7942_2486	0.87	+0.7
2,568,103	-		Synpcc7942_2486	0.87	-0.6
2,568,103	-		Synpcc7942_2486	0.87	+1.0
2,568,128	-		Synpcc7942_2486	0.89	+1.3
2,568,141	-		Synpcc7942_2486	0.90	+3.3
2,568,143	+		Synpcc7942_2486	0.90	+5.2
2,568,151	-				+3.6
2,568,169	-				+1.4
2,568,186	+				+0.2
2,568,208	+				+3.8
2,568,215	+				+0.4
2,568,216	+				+1.6
2,568,230	-				+4.0
2,568,246	+				-2.3
2,568,246	+				+3.1
2,568,246	+				+1.0
2,568,246	+				+1.7
2,568,251	+				-2.5
2,568,259	-				+1.1
2,568,301	+				+0.5
2,568,309	-				+2.9
2,568,309	-				-0.0
2,568,324	-				+2.4
2,568,564	-				-0.0
2,568,590	+				+1.0
2,568,602	+				-0.9
2,568,625	-				-0.4
2,568,637	+		Synpcc7942_2487	0.11	+1.0
2,568,663	+		Synpcc7942_2487	0.23	-0.6
2,568,664	+		Synpcc7942_2487	0.23	-0.6
2,568,672	-		Synpcc7942_2487	0.27	-0.8
2,568,672	-		Synpcc7942_2487	0.27	-1.2
2,568,672	-		Synpcc7942_2487	0.27	-1.5
2,568,682	-		Synpcc7942_2487	0.32	-1.6
2,568,785	+		Synpcc7942_2487	0.79	-0.0
2,568,809	+		Synpcc7942_2487	0.89	-1.1
2,568,831	+				-1.3
2,568,839	-				-1.4
2,568,868	+				-1.5
2,568,874	-				-0.0
2,568,874	-				-0.3
2,568,874	-				-1.3
2,568,874	-				-0.0
2,568,875	+				-0.4
2,568,876	+				+1.0
2,568,876	+				+0.1
2,568,876	+				+1.0
2,568,876	+				+2.0
2,568,876	+				+0.9
2,568,876	+				-1.1
2,568,884	-				-1.7
2,568,884	-				+1.5
2,568,884	-				+3.0
2,568,884	-				+1.0
2,568,884	-				-0.8
2,568,884	-				-0.5
2,568,884	-				-0.0
2,568,884	-				-0.8
2,568,961	+				-0.3
2,568,969	-		Synpcc7942_2488	0.11	+0.1
2,568,971	+		Synpcc7942_2488	0.11	+0.3
2,568,995	-		Synpcc7942_2488	0.15	-1.1
2,568,998	-		Synpcc7942_2488	0.16	-0.6
2,569,047	+		Synpcc7942_2488	0.24	-1.4
2,569,059	+		Synpcc7942_2488	0.26	+1.0
2,569,060	-		Synpcc7942_2488	0.26	-0.2
2,569,064	+		Synpcc7942_2488	0.26	+1.0
2,569,064	+		Synpcc7942_2488	0.26	-1.3
2,569,072	-		Synpcc7942_2488	0.28	-0.5
2,569,072	-				+0.3
2,569,072	-		Synpcc7942_2488	0.28	+2.1
2,569,072	-		Synpcc7942_2488	0.28	-1.1
2,569,074	+		Synpcc7942_2488	0.28	+3.3
2,569,107	+		Synpcc7942_2488	0.33	+0.1
2,569,113	+		Synpcc7942_2488	0.34	-1.4
2,569,121	-		Synpcc7942_2488	0.36	-1.6
2,569,152	+		Synpcc7942_2488	0.41	+0.3
2,569,261	-		Synpcc7942_2488	0.59	-0.4
2,569,268	-		Synpcc7942_2488	0.60	-0.4
2,569,272	+		Synpcc7942_2488	0.61	-0.4
2,569,274	+				-0.3
2,569,275	-		Synpcc7942_2488	0.61	+1.0
2,569,280	-		Synpcc7942_2488	0.62	+1.0
2,569,282	+		Synpcc7942_2488	0.62	+2.0
2,569,282	+		Synpcc7942_2488	0.62	-0.4
2,569,287	+		Synpcc7942_2488	0.63	-0.8
2,569,324	-		Synpcc7942_2488	0.69	-0.9
2,569,331	+		Synpcc7942_2488	0.70	-1.6
2,569,342	+		Synpcc7942_2488	0.72	+0.4
2,569,342	+		Synpcc7942_2488	0.72	-1.4
2,569,342	+		Synpcc7942_2488	0.72	+1.4
2,569,342	+		Synpcc7942_2488	0.72	+1.0
2,569,350	-		Synpcc7942_2488	0.73	-0.8
2,569,354	+		Synpcc7942_2488	0.74	-2.4
2,569,373	+		Synpcc7942_2488	0.77	+1.0
2,569,373	+		Synpcc7942_2488	0.77	+1.8
2,569,379	-		Synpcc7942_2488	0.78	+1.4
2,569,411	+		Synpcc7942_2488	0.83	-0.9
2,569,430	+		Synpcc7942_2488	0.87	-1.0
2,569,430	-		Synpcc7942_2488	0.87	-1.2
2,569,445	-		Synpcc7942_2488	0.89	-0.9
2,569,446	-		Synpcc7942_2488	0.89	-0.0
2,569,451	-				+1.3
2,569,478	-				-0.2
2,569,560	-				-0.2
2,569,585	-				+1.6
2,569,591	-				+0.2
2,569,593	-				+0.6
2,569,629	-		Synpcc7942_2489	0.13	-0.6
2,569,631	+		Synpcc7942_2489	0.13	-1.8
2,569,633	-		Synpcc7942_2489	0.14	+0.9
2,569,663	+		Synpcc7942_2489	0.25	+3.5
2,569,675	+		Synpcc7942_2489	0.29	-1.2
2,569,682	+		Synpcc7942_2489	0.32	-0.5
2,569,683	-		Synpcc7942_2489	0.32	-1.5
2,569,702	+		Synpcc7942_2489	0.39	+0.5
2,569,703	+		Synpcc7942_2489	0.39	+1.0
2,569,710	-		Synpcc7942_2489	0.42	-2.9
2,569,745	+		Synpcc7942_2489	0.55	-0.4
2,569,753	-		Synpcc7942_2489	0.58	-1.0
2,569,794	+		Synpcc7942_2489	0.72	+0.3
2,569,794	+		Synpcc7942_2489	0.72	-1.0
2,569,802	-		Synpcc7942_2489	0.75	-0.0
2,569,808	+		Synpcc7942_2489	0.78	-1.0