Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2405

Experiment: Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1
2,477,742	+				+1.0
2,477,790	+				+0.1
2,477,791	-				-1.6
2,477,798	-				-1.0
2,477,801	-				+1.3
2,477,874	-				-0.7
2,477,880	-				+1.0
2,477,920	+		Synpcc7942_2404	0.15	+1.5
2,477,925	+		Synpcc7942_2404	0.16	+0.1
2,477,933	-		Synpcc7942_2404	0.17	-1.1
2,477,947	+		Synpcc7942_2404	0.19	-0.0
2,477,949	+		Synpcc7942_2404	0.19	+1.0
2,477,976	-		Synpcc7942_2404	0.23	-0.7
2,477,987	+		Synpcc7942_2404	0.24	-0.0
2,477,997	+		Synpcc7942_2404	0.26	-1.3
2,478,011	-		Synpcc7942_2404	0.28	-0.9
2,478,021	-		Synpcc7942_2404	0.29	+0.2
2,478,021	-		Synpcc7942_2404	0.29	-0.5
2,478,027	-		Synpcc7942_2404	0.30	-1.4
2,478,047	+		Synpcc7942_2404	0.32	-0.3
2,478,060	+		Synpcc7942_2404	0.34	-3.5
2,478,061	-		Synpcc7942_2404	0.34	-0.4
2,478,068	-		Synpcc7942_2404	0.35	-0.8
2,478,172	-		Synpcc7942_2404	0.49	-0.9
2,478,191	+		Synpcc7942_2404	0.52	-1.1
2,478,191	+		Synpcc7942_2404	0.52	-0.6
2,478,199	-		Synpcc7942_2404	0.53	-1.2
2,478,199	-		Synpcc7942_2404	0.53	-0.3
2,478,236	-		Synpcc7942_2404	0.58	-0.2
2,478,256	+		Synpcc7942_2404	0.61	-0.7
2,478,261	+		Synpcc7942_2404	0.61	-1.6
2,478,261	+		Synpcc7942_2404	0.61	+1.3
2,478,323	+		Synpcc7942_2404	0.70	+1.0
2,478,331	-		Synpcc7942_2404	0.71	+0.4
2,478,347	+		Synpcc7942_2404	0.73	-1.1
2,478,347	+		Synpcc7942_2404	0.73	-1.6
2,478,365	+		Synpcc7942_2404	0.75	-0.9
2,478,375	+		Synpcc7942_2404	0.77	-0.6
2,478,380	+		Synpcc7942_2404	0.77	-1.0
2,478,389	+		Synpcc7942_2404	0.79	-0.2
2,478,419	+		Synpcc7942_2404	0.83	+1.6
2,478,613	+				-1.0
2,478,626	+				+0.9
2,478,629	+				-1.0
2,478,631	-				-1.7
2,478,684	-				-0.5
2,478,687	+				+1.6
2,478,695	-				+1.0
2,478,703	-				-0.6
2,478,713	+				-1.2
2,478,730	+				+0.5
2,478,731	+				+3.0
2,478,731	+				-1.3
2,478,731	+				-1.3
2,478,736	+				+0.4
2,478,736	+				-0.8
2,478,736	+				+1.0
2,478,739	-				-0.3
2,478,739	-				+1.0
2,478,739	-				+1.0
2,478,744	-				-0.0
2,478,744	-				-1.8
2,478,744	-				-1.0
2,478,772	+		Synpcc7942_2405	0.13	+2.6
2,478,794	+		Synpcc7942_2405	0.22	+3.0
2,478,828	+		Synpcc7942_2405	0.35	+0.3
2,478,881	-		Synpcc7942_2405	0.56	-2.4
2,478,881	-		Synpcc7942_2405	0.56	+1.5
2,478,913	+		Synpcc7942_2405	0.68	+3.3
2,478,919	+		Synpcc7942_2405	0.71	-0.5
2,478,921	-		Synpcc7942_2405	0.71	-0.9
2,478,921	-		Synpcc7942_2405	0.71	+1.8
2,478,924	+		Synpcc7942_2405	0.73	+0.5
2,478,924	+		Synpcc7942_2405	0.73	-1.2
2,478,929	-		Synpcc7942_2405	0.75	-0.2
2,478,932	-				-2.8
2,478,995	+				+1.0