Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2387

Experiment: Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1
2,456,111	-	hypD	Synpcc7942_2386	0.10	-0.0
2,456,140	-	hypD	Synpcc7942_2386	0.13	-0.8
2,456,145	-	hypD	Synpcc7942_2386	0.13	-1.1
2,456,147	+	hypD	Synpcc7942_2386	0.13	-2.1
2,456,191	+	hypD	Synpcc7942_2386	0.17	-1.2
2,456,247	+	hypD	Synpcc7942_2386	0.23	+1.0
2,456,247	+	hypD	Synpcc7942_2386	0.23	+1.0
2,456,255	-	hypD	Synpcc7942_2386	0.23	+1.4
2,456,271	+	hypD	Synpcc7942_2386	0.25	+0.3
2,456,282	-	hypD	Synpcc7942_2386	0.26	-0.2
2,456,310	-	hypD	Synpcc7942_2386	0.28	-1.0
2,456,310	-	hypD	Synpcc7942_2386	0.28	-0.3
2,456,334	-	hypD	Synpcc7942_2386	0.30	-0.0
2,456,343	+	hypD	Synpcc7942_2386	0.31	+1.9
2,456,343	+	hypD	Synpcc7942_2386	0.31	+1.0
2,456,343	+	hypD	Synpcc7942_2386	0.31	+0.8
2,456,365	-	hypD	Synpcc7942_2386	0.33	-1.3
2,456,499	+	hypD	Synpcc7942_2386	0.45	+0.1
2,456,505	-	hypD	Synpcc7942_2386	0.46	-0.3
2,456,531	+	hypD	Synpcc7942_2386	0.48	+0.3
2,456,539	+	hypD	Synpcc7942_2386	0.49	-0.9
2,456,564	-	hypD	Synpcc7942_2386	0.51	-0.1
2,456,577	+	hypD	Synpcc7942_2386	0.52	-0.7
2,456,577	+	hypD	Synpcc7942_2386	0.52	-2.0
2,456,582	+	hypD	Synpcc7942_2386	0.53	+0.3
2,456,582	+	hypD	Synpcc7942_2386	0.53	-1.0
2,456,582	+	hypD	Synpcc7942_2386	0.53	-1.0
2,456,692	-	hypD	Synpcc7942_2386	0.63	+0.3
2,456,693	-	hypD	Synpcc7942_2386	0.63	-1.3
2,456,702	-	hypD	Synpcc7942_2386	0.64	-0.0
2,456,727	-	hypD	Synpcc7942_2386	0.66	-0.9
2,456,751	+	hypD	Synpcc7942_2386	0.68	+0.4
2,456,758	-	hypD	Synpcc7942_2386	0.69	-1.3
2,456,783	-	hypD	Synpcc7942_2386	0.71	-0.6
2,456,966	-	hypD	Synpcc7942_2386	0.88	-0.8
2,457,002	+				-2.4
2,457,010	-				-0.0
2,457,071	-				+0.6
2,457,116	+				-1.9
2,457,247	-				-1.0
2,457,249	+				-0.0
2,457,284	+				+1.4
2,457,294	-				-0.2
2,457,425	+		Synpcc7942_2387	0.16	-1.8
2,457,433	-		Synpcc7942_2387	0.16	-0.0
2,457,440	+		Synpcc7942_2387	0.17	-1.4
2,457,448	-		Synpcc7942_2387	0.17	-0.6
2,457,448	-		Synpcc7942_2387	0.17	-0.6
2,457,448	-		Synpcc7942_2387	0.17	+1.0
2,457,457	-		Synpcc7942_2387	0.18	-1.8
2,457,470	-		Synpcc7942_2387	0.18	-0.3
2,457,482	-		Synpcc7942_2387	0.19	-0.6
2,457,528	-		Synpcc7942_2387	0.21	-1.9
2,457,533	+		Synpcc7942_2387	0.21	-2.4
2,457,549	-		Synpcc7942_2387	0.22	-0.0
2,457,549	-		Synpcc7942_2387	0.22	-0.2
2,457,612	+		Synpcc7942_2387	0.25	-0.9
2,457,647	+		Synpcc7942_2387	0.27	-1.8
2,457,969	+		Synpcc7942_2387	0.43	-1.4
2,457,987	+		Synpcc7942_2387	0.44	-0.0
2,457,987	+		Synpcc7942_2387	0.44	+0.8
2,457,987	+		Synpcc7942_2387	0.44	-1.8
2,457,995	-		Synpcc7942_2387	0.44	-1.0
2,457,996	-		Synpcc7942_2387	0.44	+2.0
2,458,008	+		Synpcc7942_2387	0.45	+2.6
2,458,057	+		Synpcc7942_2387	0.47	+1.0
2,458,076	+		Synpcc7942_2387	0.48	-2.0
2,458,112	+		Synpcc7942_2387	0.50	-0.2
2,458,133	-		Synpcc7942_2387	0.51	+2.6
2,458,137	+		Synpcc7942_2387	0.51	-1.6
2,458,142	+		Synpcc7942_2387	0.52	-0.6
2,458,220	+		Synpcc7942_2387	0.55	-0.0
2,458,231	+		Synpcc7942_2387	0.56	-1.8
2,458,263	+		Synpcc7942_2387	0.58	+1.0
2,458,271	-		Synpcc7942_2387	0.58	-0.0
2,458,295	-		Synpcc7942_2387	0.59	-0.8
2,458,322	-		Synpcc7942_2387	0.60	-0.6
2,458,325	+		Synpcc7942_2387	0.61	-1.1
2,458,378	+		Synpcc7942_2387	0.63	-2.0
2,458,386	-		Synpcc7942_2387	0.64	-0.4
2,458,388	+		Synpcc7942_2387	0.64	-0.7
2,458,388	+		Synpcc7942_2387	0.64	-0.0
2,458,388	+		Synpcc7942_2387	0.64	+0.4
2,458,396	-		Synpcc7942_2387	0.64	-1.3
2,458,396	-				+2.0
2,458,396	-		Synpcc7942_2387	0.64	-0.2
2,458,453	+		Synpcc7942_2387	0.67	+0.4
2,458,475	-		Synpcc7942_2387	0.68	-0.0
2,458,488	+		Synpcc7942_2387	0.69	+1.0
2,458,488	+		Synpcc7942_2387	0.69	-0.5
2,458,607	+		Synpcc7942_2387	0.75	-1.1
2,458,655	+		Synpcc7942_2387	0.77	-1.5
2,458,655	+		Synpcc7942_2387	0.77	-1.3
2,458,655	+		Synpcc7942_2387	0.77	-1.6
2,458,677	+		Synpcc7942_2387	0.78	-0.6
2,458,725	-		Synpcc7942_2387	0.80	-1.0
2,458,747	-		Synpcc7942_2387	0.82	-1.0
2,458,798	-		Synpcc7942_2387	0.84	-1.9
2,458,815	-		Synpcc7942_2387	0.85	-0.9
2,458,858	-		Synpcc7942_2387	0.87	-2.3
2,458,888	+		Synpcc7942_2387	0.89	-0.6
2,459,036	+				-2.5
2,459,038	+				+1.0
2,459,131	+				-2.1
2,459,169	-				-0.0
2,459,247	+				-0.0
2,459,247	+				+1.0
2,459,247	+				-1.8
2,459,247	+				+1.4
2,459,250	-				-0.8
2,459,255	-				+0.3
2,459,365	-	oxdC	Synpcc7942_2388	0.17	-1.3
2,459,371	-	oxdC	Synpcc7942_2388	0.18	-1.4
2,459,563	+	oxdC	Synpcc7942_2388	0.34	-1.0
2,459,563	+	oxdC	Synpcc7942_2388	0.34	-2.3
2,459,569	-	oxdC	Synpcc7942_2388	0.35	+1.0
2,459,634	+	oxdC	Synpcc7942_2388	0.40	+1.0
2,459,634	+	oxdC	Synpcc7942_2388	0.40	-0.7
2,459,642	-	oxdC	Synpcc7942_2388	0.41	-0.8
2,459,642	-	oxdC	Synpcc7942_2388	0.41	-0.6
2,459,667	-	oxdC	Synpcc7942_2388	0.43	+0.3
2,459,691	+	oxdC	Synpcc7942_2388	0.45	-1.0
2,459,699	-	oxdC	Synpcc7942_2388	0.46	-0.6
2,459,794	+	oxdC	Synpcc7942_2388	0.54	-0.9
2,459,796	+	oxdC	Synpcc7942_2388	0.54	-0.9
2,460,075	+	oxdC	Synpcc7942_2388	0.78	-1.2