Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2382

Experiment: Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1
2,447,883	+				-1.8
2,447,885	-				+0.4
2,448,002	+				-0.8
2,448,009	+				+1.3
2,448,009	+				-0.0
2,448,010	-				-0.0
2,448,041	+				+1.0
2,448,067	+				+1.0
2,448,876	+				-0.8
2,448,876	+				-0.7
2,448,876	+				-0.8
2,448,876	+				-0.9
2,448,876	+				-1.1
2,448,876	+				-0.5
2,448,876	+				-0.9
2,448,876	+				-1.6
2,448,876	+				-0.0
2,448,876	+				-0.0
2,448,878	+				-1.1
2,448,884	-				+0.2
2,448,884	-				-0.5
2,448,884	-				-0.4
2,448,884	-				-1.2
2,448,884	-				-1.7
2,448,884	-				-0.0
2,448,884	-				-1.4
2,448,884	-				+1.0
2,448,884	-				-1.0
2,448,884	-				-0.3
2,448,886	+				-1.2
2,448,895	+				+1.0
2,448,919	+				-0.2
2,448,919	+				+0.1
2,448,924	+				-0.6
2,448,927	-				+1.6
2,448,940	+				-0.0
2,448,946	+				+2.6
2,448,947	-				+2.6
2,448,948	-				-0.8
2,448,962	+				-0.1
2,448,974	+				+1.6
2,448,976	-				-0.8
2,449,033	-	hemN	Synpcc7942_2382	0.13	-1.4
2,449,058	+	hemN	Synpcc7942_2382	0.15	-1.8
2,449,059	+				+2.0
2,449,066	-	hemN	Synpcc7942_2382	0.16	-0.1
2,449,069	-	hemN	Synpcc7942_2382	0.16	-0.7
2,449,071	-	hemN	Synpcc7942_2382	0.16	+0.3
2,449,074	+	hemN	Synpcc7942_2382	0.16	+0.9
2,449,082	-	hemN	Synpcc7942_2382	0.17	-0.5
2,449,092	+	hemN	Synpcc7942_2382	0.18	-0.9
2,449,122	+	hemN	Synpcc7942_2382	0.20	-0.9
2,449,133	+	hemN	Synpcc7942_2382	0.21	-0.1
2,449,133	+	hemN	Synpcc7942_2382	0.21	-1.0
2,449,133	+	hemN	Synpcc7942_2382	0.21	-0.6
2,449,141	-	hemN	Synpcc7942_2382	0.22	+0.7
2,449,146	-	hemN	Synpcc7942_2382	0.22	+0.5
2,449,158	-	hemN	Synpcc7942_2382	0.23	+1.0
2,449,169	+	hemN	Synpcc7942_2382	0.24	+1.0
2,449,256	+	hemN	Synpcc7942_2382	0.32	-2.2
2,449,264	-	hemN	Synpcc7942_2382	0.32	+1.4
2,449,271	-	hemN	Synpcc7942_2382	0.33	+0.4
2,449,272	+	hemN	Synpcc7942_2382	0.33	-0.4
2,449,272	+	hemN	Synpcc7942_2382	0.33	-0.1
2,449,272	+	hemN	Synpcc7942_2382	0.33	+0.2
2,449,354	-	hemN	Synpcc7942_2382	0.40	+1.7
2,449,371	+	hemN	Synpcc7942_2382	0.41	+0.4
2,449,386	+	hemN	Synpcc7942_2382	0.43	-0.9
2,449,394	-	hemN	Synpcc7942_2382	0.43	+1.4
2,449,394	-	hemN	Synpcc7942_2382	0.43	+1.0
2,449,394	-	hemN	Synpcc7942_2382	0.43	+2.1
2,449,414	+	hemN	Synpcc7942_2382	0.45	-0.7
2,449,422	-	hemN	Synpcc7942_2382	0.46	+0.7
2,449,454	-	hemN	Synpcc7942_2382	0.48	-1.1
2,449,470	-	hemN	Synpcc7942_2382	0.50	+2.0
2,449,484	-	hemN	Synpcc7942_2382	0.51	-0.9
2,449,490	+	hemN	Synpcc7942_2382	0.51	-1.8
2,449,499	+	hemN	Synpcc7942_2382	0.52	-0.3
2,449,499	+	hemN	Synpcc7942_2382	0.52	-0.2
2,449,499	+	hemN	Synpcc7942_2382	0.52	+1.6
2,449,507	-	hemN	Synpcc7942_2382	0.53	-0.4
2,449,507	-	hemN	Synpcc7942_2382	0.53	-0.6
2,449,507	-				-0.8
2,449,507	-	hemN	Synpcc7942_2382	0.53	+0.7
2,449,522	+	hemN	Synpcc7942_2382	0.54	-1.0
2,449,627	+	hemN	Synpcc7942_2382	0.63	+1.6
2,449,656	-	hemN	Synpcc7942_2382	0.65	-0.2
2,449,656	-	hemN	Synpcc7942_2382	0.65	-0.6
2,449,657	-	hemN	Synpcc7942_2382	0.65	-0.1
2,449,679	-	hemN	Synpcc7942_2382	0.67	-1.0
2,449,693	+	hemN	Synpcc7942_2382	0.68	-0.6
2,449,704	+	hemN	Synpcc7942_2382	0.69	-0.7
2,449,704	+	hemN	Synpcc7942_2382	0.69	-1.3
2,449,712	-	hemN	Synpcc7942_2382	0.70	-0.1
2,449,718	+	hemN	Synpcc7942_2382	0.70	-0.6
2,449,718	-	hemN	Synpcc7942_2382	0.70	-1.3
2,449,722	+	hemN	Synpcc7942_2382	0.71	-0.6
2,449,743	+	hemN	Synpcc7942_2382	0.73	-1.6
2,449,805	+	hemN	Synpcc7942_2382	0.78	-1.5
2,449,812	+	hemN	Synpcc7942_2382	0.78	+0.3
2,449,825	+	hemN	Synpcc7942_2382	0.79	-0.6
2,449,848	-	hemN	Synpcc7942_2382	0.81	-1.9
2,449,886	+	hemN	Synpcc7942_2382	0.85	-1.5
2,449,894	-	hemN	Synpcc7942_2382	0.85	+1.3
2,449,956	+				-0.3
2,449,956	+				+1.0
2,449,966	-				-0.0
2,449,966	-				-1.2
2,450,005	+				-3.1
2,450,037	-				+0.1
2,450,085	+				+1.0
2,450,085	+				-0.5
2,450,093	-				-0.5
2,450,093	-				-0.6
2,450,093	-				-1.0
2,450,103	-				-0.0
2,450,124	-				-0.8
2,450,129	-				+1.5
2,450,129	-				-0.1
2,450,133	+				-0.1
2,450,148	+				-0.4
2,450,148	+				-0.3
2,450,156	-				-2.1
2,450,156	-				-0.2
2,450,171	+				-0.8
2,450,173	-				-0.6
2,450,189	-				+1.0