Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2352

Experiment: Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1
2,418,714	-		Synpcc7942_2351	0.33	+0.2
2,419,052	-		Synpcc7942_2351	0.61	-1.2
2,419,053	+		Synpcc7942_2351	0.61	+1.0
2,419,118	+		Synpcc7942_2351	0.67	+1.0
2,419,556	-				+1.0
2,419,573	+				-0.7
2,419,593	-				-1.8
2,419,593	-				+0.3
2,419,723	-	lrtA	Synpcc7942_2352	0.24	-0.4
2,419,729	+	lrtA	Synpcc7942_2352	0.25	-0.3
2,419,766	-	lrtA	Synpcc7942_2352	0.31	-1.5
2,419,767	-	lrtA	Synpcc7942_2352	0.31	-1.0
2,419,879	+	lrtA	Synpcc7942_2352	0.49	-0.6
2,419,879	+	lrtA	Synpcc7942_2352	0.49	-0.9
2,420,231	+				-1.2
2,420,309	+				-0.6
2,420,386	+				-1.3
2,421,141	+				+0.2
2,421,182	+				+0.3
2,421,187	+				+0.8