Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1794

Experiment: Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1
1,864,264	+				+0.6
1,864,272	-				-0.9
1,864,272	-				-1.1
1,864,282	-				-1.0
1,864,318	-				-0.4
1,864,318	-				+1.0
1,864,318	-				-1.3
1,864,318	-				-0.1
1,864,318	-				+0.2
1,864,318	-				-0.3
1,864,318	-				-0.6
1,864,336	+				-0.9
1,864,341	-				-1.1
1,864,379	-				-0.4
1,864,540	-	trxA	Synpcc7942_1793	0.31	+1.0
1,864,573	-	trxA	Synpcc7942_1793	0.41	+1.0
1,864,575	+	trxA	Synpcc7942_1793	0.42	+1.0
1,864,580	+	trxA	Synpcc7942_1793	0.43	-0.0
1,864,580	+	trxA	Synpcc7942_1793	0.43	+1.0
1,864,583	-	trxA	Synpcc7942_1793	0.44	-0.3
1,864,602	+	trxA	Synpcc7942_1793	0.50	-1.0
1,864,656	-	trxA	Synpcc7942_1793	0.67	-0.6
1,864,656	-	trxA	Synpcc7942_1793	0.67	+1.0
1,864,679	+	trxA	Synpcc7942_1793	0.74	-0.0
1,864,697	+	trxA	Synpcc7942_1793	0.79	+1.0
1,864,726	-	trxA	Synpcc7942_1793	0.88	-0.6
1,864,809	-				-1.6
1,864,844	-				+1.0
1,864,851	-				+0.4
1,864,862	+				-2.7
1,864,900	-		Synpcc7942_1794	0.11	-0.0
1,864,904	-		Synpcc7942_1794	0.12	+2.6
1,864,905	-		Synpcc7942_1794	0.12	-1.7
1,864,907	+		Synpcc7942_1794	0.12	-2.3
1,864,939	+		Synpcc7942_1794	0.15	+1.0
1,864,948	-		Synpcc7942_1794	0.15	+1.0
1,864,957	+		Synpcc7942_1794	0.16	-0.0
1,865,023	-		Synpcc7942_1794	0.22	+1.4
1,865,047	-		Synpcc7942_1794	0.24	-0.6
1,865,075	+		Synpcc7942_1794	0.26	-0.0
1,865,075	-		Synpcc7942_1794	0.26	-1.0
1,865,082	+		Synpcc7942_1794	0.27	+2.0
1,865,083	-		Synpcc7942_1794	0.27	-0.6
1,865,112	+		Synpcc7942_1794	0.29	-1.0
1,865,126	+		Synpcc7942_1794	0.30	-1.0
1,865,136	+		Synpcc7942_1794	0.31	+1.0
1,865,136	+		Synpcc7942_1794	0.31	+1.0
1,865,143	+		Synpcc7942_1794	0.32	-0.6
1,865,143	+		Synpcc7942_1794	0.32	-0.0
1,865,148	+		Synpcc7942_1794	0.32	-0.6
1,865,151	-		Synpcc7942_1794	0.32	-0.0
1,865,157	+		Synpcc7942_1794	0.33	-2.5
1,865,167	+		Synpcc7942_1794	0.34	-1.3
1,865,167	+		Synpcc7942_1794	0.34	+2.0
1,865,246	-		Synpcc7942_1794	0.41	-0.6
1,865,284	+		Synpcc7942_1794	0.44	-0.7
1,865,388	-		Synpcc7942_1794	0.53	+1.0
1,865,399	-		Synpcc7942_1794	0.54	+0.4
1,865,417	+		Synpcc7942_1794	0.55	+1.0
1,865,425	-		Synpcc7942_1794	0.56	-1.9
1,865,427	+		Synpcc7942_1794	0.56	-0.0
1,865,474	+		Synpcc7942_1794	0.60	+1.0
1,865,534	+		Synpcc7942_1794	0.65	+0.1
1,865,549	-		Synpcc7942_1794	0.66	-0.6
1,865,551	+		Synpcc7942_1794	0.66	-0.8
1,865,552	+		Synpcc7942_1794	0.66	-0.8
1,865,552	-		Synpcc7942_1794	0.66	+1.0
1,865,570	-		Synpcc7942_1794	0.68	-1.8
1,865,599	+		Synpcc7942_1794	0.70	+1.0
1,865,640	-		Synpcc7942_1794	0.74	-0.0
1,865,656	+		Synpcc7942_1794	0.75	-0.0
1,865,690	+		Synpcc7942_1794	0.78	-2.2
1,865,691	-		Synpcc7942_1794	0.78	-4.0
1,865,695	+		Synpcc7942_1794	0.79	+1.0
1,865,727	-		Synpcc7942_1794	0.81	-1.0
1,865,739	-		Synpcc7942_1794	0.82	+1.0
1,865,745	-		Synpcc7942_1794	0.83	+1.0
1,865,745	-		Synpcc7942_1794	0.83	+1.0
1,865,748	-		Synpcc7942_1794	0.83	+1.0
1,865,753	-		Synpcc7942_1794	0.84	+1.0
1,865,783	+		Synpcc7942_1794	0.86	+1.0
1,865,822	-		Synpcc7942_1794	0.89	+1.0
1,865,833	-				+2.0
1,865,878	+				+1.0
1,865,887	-				+1.0
1,865,892	-				+1.0
1,865,892	-				+1.4
1,865,909	-				-1.0
1,865,926	+				+2.0
1,865,929	-				-3.0
1,865,931	-				+0.2
1,865,947	+				-0.8
1,865,962	+				-0.4
1,865,962	-				-0.7
1,865,967	+				-2.6
1,865,967	+				-1.6
1,865,970	-				-0.9
1,865,975	-				-1.0
1,865,977	+				-2.2
1,865,985	-				-0.1
1,865,986	+				-1.2
1,866,418	+				-0.8
1,866,449	+				-0.0
1,866,449	+				+1.0
1,866,452	-				+1.0
1,866,481	+				-0.0
1,866,481	+				-2.8
1,866,487	-		Synpcc7942_1796	0.11	-1.3
1,866,495	-		Synpcc7942_1796	0.13	-0.8
1,866,512	+		Synpcc7942_1796	0.19	-0.0
1,866,512	+		Synpcc7942_1796	0.19	-1.4
1,866,512	+		Synpcc7942_1796	0.19	-0.8
1,866,586	+		Synpcc7942_1796	0.44	-0.7
1,866,586	+		Synpcc7942_1796	0.44	-0.6
1,866,594	+		Synpcc7942_1796	0.47	-0.9
1,866,594	-		Synpcc7942_1796	0.47	-1.0
1,866,670	-		Synpcc7942_1796	0.73	-0.7
1,866,672	+		Synpcc7942_1796	0.73	-1.5
1,866,672	+		Synpcc7942_1796	0.73	+1.4
1,866,680	-		Synpcc7942_1796	0.76	-0.6
1,866,723	+				+1.4
1,866,741	+				-1.2
1,866,741	+				-1.0
1,866,746	+				-0.7
1,866,746	+				-1.7
1,866,746	+				-1.3
1,866,751	+				-0.0
1,866,751	+				-1.0
1,866,753	-				-0.0
1,866,754	-				-0.9
1,866,754	-				-1.0
1,866,786	+				-0.5
1,866,794	-				+2.0
1,866,794	-				-1.2
1,866,794	-				+1.0
1,866,808	+				+1.0
1,866,811	-				-0.6
1,866,813	+				-0.7
1,866,816	-				-0.5
1,866,816	-				-0.0
1,866,816	-				-1.6
1,866,821	-				+1.0
1,866,821	-				-0.2
1,866,822	+				+0.6
1,866,869	+				+0.4
1,866,869	+				+0.2
1,866,870	+				-1.3
1,866,877	-				-1.6
1,866,877	-				-0.4
1,866,877	-				+1.2
1,866,879	+				-0.2
1,866,879	+				+1.0
1,866,879	+				-1.4
1,866,879	+				-1.6
1,866,880	+				+0.4
1,866,880	+				-0.6
1,866,887	-				-0.5
1,866,887	-				+1.0
1,866,887	-				-0.4
1,866,887	-				-2.7
1,866,925	+		Synpcc7942_1797	0.10	+1.4
1,866,943	+		Synpcc7942_1797	0.14	+1.0