Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1574

Experiment: Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1
1,632,895	-				-0.6
1,632,904	-				+0.4
1,632,919	+				-0.3
1,632,920	+				+3.0
1,632,927	-				-0.3
1,632,927	-				+1.3
1,632,962	+				+1.2
1,632,971	+				-0.2
1,632,976	+				-0.4
1,632,988	+				+0.2
1,632,991	-				-1.1
1,633,023	+				-1.6
1,633,023	+				-1.4
1,633,038	-				-0.3
1,633,073	+				-0.8
1,633,101	+		Synpcc7942_1573	0.13	+0.0
1,633,101	-		Synpcc7942_1573	0.13	-1.6
1,633,111	+		Synpcc7942_1573	0.15	-0.3
1,633,119	-		Synpcc7942_1573	0.16	+0.3
1,633,119	-		Synpcc7942_1573	0.16	-0.8
1,633,119	-		Synpcc7942_1573	0.16	+0.4
1,633,121	+		Synpcc7942_1573	0.16	-0.7
1,633,129	-		Synpcc7942_1573	0.17	-1.4
1,633,151	-		Synpcc7942_1573	0.20	-3.0
1,633,151	-		Synpcc7942_1573	0.20	+1.0
1,633,151	-		Synpcc7942_1573	0.20	-1.1
1,633,159	+		Synpcc7942_1573	0.21	-0.7
1,633,167	-		Synpcc7942_1573	0.22	-1.7
1,633,204	+		Synpcc7942_1573	0.26	-1.5
1,633,204	-		Synpcc7942_1573	0.26	-1.0
1,633,213	+		Synpcc7942_1573	0.27	-0.4
1,633,213	+		Synpcc7942_1573	0.27	+0.7
1,633,213	+		Synpcc7942_1573	0.27	-0.6
1,633,221	-		Synpcc7942_1573	0.28	+1.0
1,633,221	-		Synpcc7942_1573	0.28	+0.5
1,633,221	-		Synpcc7942_1573	0.28	+0.0
1,633,221	-		Synpcc7942_1573	0.28	+0.0
1,633,282	+		Synpcc7942_1573	0.36	+1.0
1,633,350	-		Synpcc7942_1573	0.44	-1.4
1,633,395	+		Synpcc7942_1573	0.50	-0.1
1,633,398	-		Synpcc7942_1573	0.50	-1.8
1,633,491	+		Synpcc7942_1573	0.62	-0.6
1,633,577	-		Synpcc7942_1573	0.73	-1.8
1,633,729	+				+1.9
1,633,796	-				-2.1
1,633,823	+				-2.1
1,633,870	+				-0.5
1,633,888	-				-1.2
1,633,911	+				+2.0
1,633,934	-				+0.3
1,633,936	+				+1.0
1,633,961	+				+0.0
1,633,963	+				-0.6
1,633,971	-				-1.8
1,634,053	+				-1.5
1,634,061	-				-0.3
1,634,076	+				-0.5
1,634,076	+				+1.0
1,634,076	+				-0.2
1,634,076	+				-1.1
1,634,210	-		Synpcc7942_1574	0.12	+1.0
1,634,234	+		Synpcc7942_1574	0.13	-0.9
1,634,246	+		Synpcc7942_1574	0.13	-1.4
1,634,249	-		Synpcc7942_1574	0.13	-0.3
1,634,254	-		Synpcc7942_1574	0.13	-0.2
1,634,254	-		Synpcc7942_1574	0.13	-0.6
1,634,268	-		Synpcc7942_1574	0.14	+0.0
1,634,277	-		Synpcc7942_1574	0.14	-0.6
1,634,288	+		Synpcc7942_1574	0.15	-1.2
1,634,294	+		Synpcc7942_1574	0.15	+1.6
1,634,296	-		Synpcc7942_1574	0.15	-0.9
1,634,304	+		Synpcc7942_1574	0.15	-1.0
1,634,346	+		Synpcc7942_1574	0.17	-0.3
1,634,364	-		Synpcc7942_1574	0.18	-1.5
1,634,421	+		Synpcc7942_1574	0.20	+0.4
1,634,501	-		Synpcc7942_1574	0.23	+1.0
1,634,525	+		Synpcc7942_1574	0.24	-0.6
1,634,528	-		Synpcc7942_1574	0.24	-0.6
1,634,531	-		Synpcc7942_1574	0.24	-0.3
1,634,555	+		Synpcc7942_1574	0.25	-0.0
1,634,582	-		Synpcc7942_1574	0.26	+0.3
1,634,606	-		Synpcc7942_1574	0.27	-1.0
1,634,620	+		Synpcc7942_1574	0.27	-0.3
1,634,620	+		Synpcc7942_1574	0.27	+0.3
1,634,620	+		Synpcc7942_1574	0.27	-1.1
1,634,634	+				-1.3
1,634,642	-		Synpcc7942_1574	0.28	+1.0
1,634,678	-				+1.0
1,634,683	+		Synpcc7942_1574	0.29	+0.4
1,634,709	-		Synpcc7942_1574	0.30	+0.9
1,634,729	+		Synpcc7942_1574	0.31	+1.0
1,634,783	-		Synpcc7942_1574	0.33	-0.9
1,634,821	+		Synpcc7942_1574	0.35	-1.4
1,634,831	-		Synpcc7942_1574	0.35	-0.9
1,634,854	+		Synpcc7942_1574	0.36	+0.3
1,634,854	+		Synpcc7942_1574	0.36	+0.6
1,634,862	-		Synpcc7942_1574	0.36	+0.5
1,634,898	-		Synpcc7942_1574	0.38	-0.9
1,634,900	-		Synpcc7942_1574	0.38	-1.7
1,634,940	+		Synpcc7942_1574	0.39	-1.3
1,634,940	+		Synpcc7942_1574	0.39	+1.0
1,634,948	-		Synpcc7942_1574	0.39	-0.4
1,634,948	-		Synpcc7942_1574	0.39	-0.7
1,634,948	-		Synpcc7942_1574	0.39	-0.7
1,634,948	-		Synpcc7942_1574	0.39	-0.8
1,634,950	+		Synpcc7942_1574	0.39	-1.8
1,634,972	-		Synpcc7942_1574	0.40	-1.0
1,634,972	-		Synpcc7942_1574	0.40	-1.0
1,634,981	+		Synpcc7942_1574	0.41	-1.3
1,634,989	-		Synpcc7942_1574	0.41	-0.6
1,634,990	-		Synpcc7942_1574	0.41	-1.2
1,634,995	+		Synpcc7942_1574	0.41	-2.5
1,634,995	+		Synpcc7942_1574	0.41	+1.0
1,634,995	+		Synpcc7942_1574	0.41	-1.6
1,635,003	-		Synpcc7942_1574	0.41	-0.3
1,635,003	-		Synpcc7942_1574	0.41	+0.3
1,635,003	-		Synpcc7942_1574	0.41	-2.0
1,635,003	-		Synpcc7942_1574	0.41	-0.3
1,635,003	-		Synpcc7942_1574	0.41	-0.2
1,635,008	-		Synpcc7942_1574	0.42	+0.3
1,635,008	-		Synpcc7942_1574	0.42	+0.9
1,635,010	+		Synpcc7942_1574	0.42	+0.0
1,635,011	+		Synpcc7942_1574	0.42	-1.0
1,635,026	+		Synpcc7942_1574	0.42	-0.3
1,635,026	+		Synpcc7942_1574	0.42	-1.5
1,635,061	-		Synpcc7942_1574	0.44	+1.8
1,635,112	-		Synpcc7942_1574	0.46	-0.6
1,635,124	+		Synpcc7942_1574	0.46	+0.0
1,635,132	-		Synpcc7942_1574	0.46	-1.8
1,635,162	-		Synpcc7942_1574	0.47	-2.2
1,635,172	+		Synpcc7942_1574	0.48	-1.3
1,635,172	+		Synpcc7942_1574	0.48	+1.1
1,635,172	+		Synpcc7942_1574	0.48	-1.0
1,635,175	-		Synpcc7942_1574	0.48	-1.7
1,635,179	+		Synpcc7942_1574	0.48	-3.3
1,635,179	+		Synpcc7942_1574	0.48	-0.7
1,635,187	-		Synpcc7942_1574	0.48	-0.8
1,635,195	+		Synpcc7942_1574	0.49	-0.1
1,635,235	-		Synpcc7942_1574	0.50	+1.0
1,635,249	+		Synpcc7942_1574	0.51	-2.0
1,635,267	-		Synpcc7942_1574	0.51	-1.1
1,635,280	-		Synpcc7942_1574	0.52	+0.6
1,635,328	-		Synpcc7942_1574	0.54	+0.4
1,635,328	-		Synpcc7942_1574	0.54	-0.5
1,635,366	+		Synpcc7942_1574	0.55	+0.3
1,635,449	-		Synpcc7942_1574	0.58	-1.3
1,635,449	-		Synpcc7942_1574	0.58	-1.2
1,635,543	+		Synpcc7942_1574	0.62	-2.6
1,635,543	+		Synpcc7942_1574	0.62	-2.5
1,635,543	+		Synpcc7942_1574	0.62	-1.0
1,635,543	+		Synpcc7942_1574	0.62	-0.8
1,635,543	+		Synpcc7942_1574	0.62	+1.0
1,635,551	-		Synpcc7942_1574	0.62	+2.6
1,635,551	-		Synpcc7942_1574	0.62	-0.8
1,635,551	-		Synpcc7942_1574	0.62	-0.9
1,635,551	-		Synpcc7942_1574	0.62	-1.4
1,635,551	-		Synpcc7942_1574	0.62	+1.0
1,635,551	-		Synpcc7942_1574	0.62	+1.0
1,635,578	-		Synpcc7942_1574	0.63	-1.0
1,635,606	+		Synpcc7942_1574	0.64	-0.9
1,635,606	+		Synpcc7942_1574	0.64	-2.0
1,635,606	+		Synpcc7942_1574	0.64	+0.2
1,635,614	-		Synpcc7942_1574	0.64	+1.0
1,635,632	+		Synpcc7942_1574	0.65	-0.6
1,635,632	+		Synpcc7942_1574	0.65	-1.8
1,635,670	+		Synpcc7942_1574	0.66	+0.4
1,635,676	-		Synpcc7942_1574	0.67	-0.6
1,635,700	-		Synpcc7942_1574	0.68	-1.0
1,635,709	-		Synpcc7942_1574	0.68	+0.6
1,635,715	+		Synpcc7942_1574	0.68	+0.0
1,635,718	+				-1.8
1,635,750	-		Synpcc7942_1574	0.69	+0.3
1,635,753	-		Synpcc7942_1574	0.70	-1.5
1,635,753	-		Synpcc7942_1574	0.70	-1.9
1,635,762	+		Synpcc7942_1574	0.70	-0.2
1,635,763	-		Synpcc7942_1574	0.70	-0.6
1,635,774	+		Synpcc7942_1574	0.70	+1.0
1,635,779	-		Synpcc7942_1574	0.70	+0.1
1,635,782	-		Synpcc7942_1574	0.71	-1.4
1,635,782	-		Synpcc7942_1574	0.71	-1.1
1,635,790	+		Synpcc7942_1574	0.71	+1.0
1,635,790	+		Synpcc7942_1574	0.71	+0.3
1,635,790	+		Synpcc7942_1574	0.71	-1.0
1,635,821	-		Synpcc7942_1574	0.72	-1.4
1,635,867	+		Synpcc7942_1574	0.74	-1.4
1,635,878	+		Synpcc7942_1574	0.74	+1.2
1,635,878	+		Synpcc7942_1574	0.74	-1.1
1,635,878	+				+0.2
1,635,878	-		Synpcc7942_1574	0.74	-1.6
1,635,883	+		Synpcc7942_1574	0.74	-0.4
1,635,886	-		Synpcc7942_1574	0.74	-2.1
1,635,886	-		Synpcc7942_1574	0.74	-0.6
1,635,886	-		Synpcc7942_1574	0.74	-0.5
1,635,903	+		Synpcc7942_1574	0.75	-1.0
1,635,903	+		Synpcc7942_1574	0.75	-0.4
1,635,908	+		Synpcc7942_1574	0.75	+0.0
1,635,911	-		Synpcc7942_1574	0.75	-0.3
1,635,911	-		Synpcc7942_1574	0.75	+1.8
1,635,921	-		Synpcc7942_1574	0.76	+0.8
1,635,933	+		Synpcc7942_1574	0.76	-1.9
1,635,936	+		Synpcc7942_1574	0.76	+1.3
1,635,973	+		Synpcc7942_1574	0.78	-1.0
1,635,973	+		Synpcc7942_1574	0.78	-1.1
1,635,996	+		Synpcc7942_1574	0.79	+1.0
1,636,004	-		Synpcc7942_1574	0.79	-0.3
1,636,045	-				-0.4
1,636,070	+		Synpcc7942_1574	0.81	+0.0
1,636,071	+		Synpcc7942_1574	0.81	+1.0
1,636,078	-		Synpcc7942_1574	0.82	-0.9
1,636,078	-		Synpcc7942_1574	0.82	+1.7
1,636,079	-		Synpcc7942_1574	0.82	-2.0
1,636,080	-		Synpcc7942_1574	0.82	-2.0
1,636,093	+		Synpcc7942_1574	0.82	+0.2
1,636,107	+		Synpcc7942_1574	0.83	+0.6
1,636,115	-		Synpcc7942_1574	0.83	-0.8
1,636,115	-		Synpcc7942_1574	0.83	-1.5
1,636,115	-		Synpcc7942_1574	0.83	+0.3
1,636,180	+		Synpcc7942_1574	0.85	+1.6
1,636,190	+		Synpcc7942_1574	0.86	+0.0
1,636,190	+		Synpcc7942_1574	0.86	-1.0
1,636,214	+		Synpcc7942_1574	0.87	-1.1
1,636,217	+		Synpcc7942_1574	0.87	-1.1
1,636,222	+		Synpcc7942_1574	0.87	+0.0
1,636,222	+		Synpcc7942_1574	0.87	-1.6
1,636,249	+		Synpcc7942_1574	0.88	+0.0
1,636,255	+		Synpcc7942_1574	0.88	-0.1
1,636,271	+		Synpcc7942_1574	0.89	-1.3
1,636,272	+		Synpcc7942_1574	0.89	-0.2
1,636,280	-		Synpcc7942_1574	0.89	+1.2
1,636,290	+		Synpcc7942_1574	0.90	+2.0
1,636,290	-		Synpcc7942_1574	0.90	+0.2
1,636,298	-		Synpcc7942_1574	0.90	-0.3
1,636,305	+				-1.6
1,636,305	+				-0.6
1,636,313	-				-1.1
1,636,313	-				+3.0
1,636,348	+				+1.6
1,636,356	-				+1.7
1,636,395	-				+0.0
1,636,410	-				-1.1
1,636,410	-				-1.3
1,636,421	-				+0.0
1,636,435	+				+1.0
1,636,443	-				-0.9
1,636,443	-				-0.7
1,636,443	-				+1.0
1,636,451	+				-1.6
1,636,457	+				-0.7
1,636,457	+				+2.3
1,636,465	-				-1.6
1,636,465	-				-0.2
1,636,466	-				+0.2
1,636,485	+				-0.7
1,636,489	-				-1.6
1,636,493	-				-0.8
1,636,498	-				-0.6
1,636,498	-				-0.4
1,636,498	-				-1.6
1,636,541	+				+0.0
1,636,549	-				+0.6
1,636,550	-				-1.0
1,636,550	-				-0.3
1,636,564	+				+0.1
1,636,568	-				+0.6
1,636,676	+				-0.3
1,636,679	-				-1.2
1,636,739	+				-0.9
1,636,744	+				-1.8
1,636,798	-	malQ	Synpcc7942_1575	0.11	+0.0
1,636,818	-	malQ	Synpcc7942_1575	0.12	+0.0
1,636,818	-	malQ	Synpcc7942_1575	0.12	+0.0
1,636,818	-	malQ	Synpcc7942_1575	0.12	-0.9
1,636,870	+	malQ	Synpcc7942_1575	0.14	+0.4
1,636,887	+	malQ	Synpcc7942_1575	0.15	-1.0
1,636,887	-	malQ	Synpcc7942_1575	0.15	+1.0
1,636,936	+	malQ	Synpcc7942_1575	0.17	-0.2
1,636,955	-	malQ	Synpcc7942_1575	0.18	-2.4
1,636,959	+	malQ	Synpcc7942_1575	0.19	-1.1
1,636,988	-	malQ	Synpcc7942_1575	0.20	-1.3
1,636,998	-				+1.0
1,636,998	-	malQ	Synpcc7942_1575	0.20	-0.2
1,636,998	-	malQ	Synpcc7942_1575	0.20	-0.6
1,637,007	+	malQ	Synpcc7942_1575	0.21	-0.0
1,637,007	+	malQ	Synpcc7942_1575	0.21	+1.4
1,637,026	+	malQ	Synpcc7942_1575	0.22	-0.7
1,637,078	+				-1.1
1,637,100	+	malQ	Synpcc7942_1575	0.25	-1.7
1,637,108	-	malQ	Synpcc7942_1575	0.26	-0.7
1,637,150	+	malQ	Synpcc7942_1575	0.28	+1.0
1,637,158	-	malQ	Synpcc7942_1575	0.28	+1.0
1,637,171	+	malQ	Synpcc7942_1575	0.29	-0.6
1,637,185	-	malQ	Synpcc7942_1575	0.30	+1.0
1,637,214	+	malQ	Synpcc7942_1575	0.31	-1.6
1,637,220	+	malQ	Synpcc7942_1575	0.31	+2.0
1,637,222	-	malQ	Synpcc7942_1575	0.31	-0.8
1,637,249	-	malQ	Synpcc7942_1575	0.33	-2.1
1,637,268	+	malQ	Synpcc7942_1575	0.34	-1.8
1,637,274	+	malQ	Synpcc7942_1575	0.34	-0.6
1,637,277	-	malQ	Synpcc7942_1575	0.34	-0.4
1,637,286	+	malQ	Synpcc7942_1575	0.35	+0.2
1,637,300	-	malQ	Synpcc7942_1575	0.35	-2.1
1,637,304	+	malQ	Synpcc7942_1575	0.35	+0.6
1,637,306	+	malQ	Synpcc7942_1575	0.35	-0.9
1,637,306	+	malQ	Synpcc7942_1575	0.35	+0.0
1,637,307	-	malQ	Synpcc7942_1575	0.36	+1.3
1,637,314	-	malQ	Synpcc7942_1575	0.36	+2.0
1,637,324	-	malQ	Synpcc7942_1575	0.36	-0.4
1,637,453	+	malQ	Synpcc7942_1575	0.43	-0.3
1,637,458	+	malQ	Synpcc7942_1575	0.43	+0.1