Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1294

Experiment: Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1
1,318,651	+				-1.3
1,318,652	+				-1.0
1,318,662	-				-1.0
1,318,662	-				+2.0
1,318,689	-				+1.6
1,318,707	-				+1.0
1,318,718	+				+1.0
1,318,718	+				-0.7
1,318,721	-				-1.6
1,318,726	-				-1.9
1,318,738	-				-2.3
1,318,766	+				+3.0
1,318,782	+				-0.6
1,318,831	-				+1.0
1,318,874	+				+0.2
1,318,879	+				-0.8
1,318,887	-				-2.0
1,318,913	-		Synpcc7942_1294	0.11	+0.3
1,318,918	+		Synpcc7942_1294	0.12	-1.2
1,318,921	-		Synpcc7942_1294	0.12	+2.4
1,318,944	+		Synpcc7942_1294	0.13	-0.2
1,318,945	-		Synpcc7942_1294	0.13	+1.0
1,318,952	-		Synpcc7942_1294	0.14	-0.8
1,318,952	-		Synpcc7942_1294	0.14	-1.4
1,318,990	-		Synpcc7942_1294	0.16	+1.6
1,319,001	+		Synpcc7942_1294	0.17	-0.9
1,319,031	+		Synpcc7942_1294	0.19	-0.4
1,319,038	+		Synpcc7942_1294	0.19	+0.2
1,319,040	-		Synpcc7942_1294	0.20	+1.2
1,319,104	+		Synpcc7942_1294	0.24	-2.1
1,319,208	-		Synpcc7942_1294	0.30	+1.3
1,319,208	-		Synpcc7942_1294	0.30	-1.2
1,319,222	+		Synpcc7942_1294	0.31	+0.7
1,319,271	-		Synpcc7942_1294	0.34	-0.9
1,319,289	+		Synpcc7942_1294	0.35	+1.0
1,319,289	+		Synpcc7942_1294	0.35	+0.0
1,319,289	+		Synpcc7942_1294	0.35	+1.0
1,319,297	-		Synpcc7942_1294	0.36	-1.0
1,319,309	+		Synpcc7942_1294	0.37	-1.8
1,319,313	-		Synpcc7942_1294	0.37	+0.1
1,319,320	+		Synpcc7942_1294	0.37	-1.4
1,319,334	+		Synpcc7942_1294	0.38	-1.5
1,319,342	-		Synpcc7942_1294	0.39	-1.4
1,319,408	-		Synpcc7942_1294	0.43	-2.6
1,319,414	+		Synpcc7942_1294	0.43	+0.2
1,319,415	+		Synpcc7942_1294	0.43	+0.9
1,319,422	+		Synpcc7942_1294	0.44	-1.7
1,319,422	-		Synpcc7942_1294	0.44	-0.4
1,319,501	+		Synpcc7942_1294	0.49	+1.0
1,319,501	+		Synpcc7942_1294	0.49	-0.9
1,319,512	+		Synpcc7942_1294	0.50	-2.0
1,319,522	+		Synpcc7942_1294	0.50	-1.0
1,319,522	+		Synpcc7942_1294	0.50	+1.8
1,319,522	+		Synpcc7942_1294	0.50	-0.6
1,319,527	+		Synpcc7942_1294	0.51	+0.2
1,319,530	-		Synpcc7942_1294	0.51	-0.9
1,319,530	-		Synpcc7942_1294	0.51	-1.1
1,319,530	-		Synpcc7942_1294	0.51	-2.8
1,319,530	-		Synpcc7942_1294	0.51	-1.3
1,319,530	-				+0.0
1,319,530	-		Synpcc7942_1294	0.51	-0.3
1,319,603	-		Synpcc7942_1294	0.55	+1.0
1,319,608	-		Synpcc7942_1294	0.56	-0.9
1,319,628	+		Synpcc7942_1294	0.57	+1.8
1,319,632	-		Synpcc7942_1294	0.57	-0.1
1,319,636	-		Synpcc7942_1294	0.57	+0.3
1,319,651	+		Synpcc7942_1294	0.58	-1.6
1,319,658	+		Synpcc7942_1294	0.59	+0.3
1,319,658	+		Synpcc7942_1294	0.59	-0.9
1,319,663	+		Synpcc7942_1294	0.59	-1.1
1,319,663	+		Synpcc7942_1294	0.59	-1.1
1,319,663	+		Synpcc7942_1294	0.59	-0.9
1,319,671	-		Synpcc7942_1294	0.60	-0.6
1,319,692	+		Synpcc7942_1294	0.61	+1.0
1,319,692	+		Synpcc7942_1294	0.61	-0.8
1,319,692	+		Synpcc7942_1294	0.61	-1.3
1,319,692	+		Synpcc7942_1294	0.61	-1.2
1,319,702	+		Synpcc7942_1294	0.62	-0.6
1,319,706	+		Synpcc7942_1294	0.62	-0.2
1,319,711	+		Synpcc7942_1294	0.62	-0.6
1,319,714	-		Synpcc7942_1294	0.62	-0.3
1,319,716	+		Synpcc7942_1294	0.63	+2.6
1,319,717	+		Synpcc7942_1294	0.63	-1.6
1,319,718	+		Synpcc7942_1294	0.63	-0.8
1,319,719	-		Synpcc7942_1294	0.63	-1.6
1,319,724	+		Synpcc7942_1294	0.63	+1.5
1,319,732	-		Synpcc7942_1294	0.64	+0.3
1,319,732	-		Synpcc7942_1294	0.64	+0.8
1,319,744	+		Synpcc7942_1294	0.64	-1.8
1,319,790	-		Synpcc7942_1294	0.67	+0.7
1,319,795	+		Synpcc7942_1294	0.68	-0.1
1,319,826	+		Synpcc7942_1294	0.70	+1.0
1,319,847	+		Synpcc7942_1294	0.71	-0.9
1,319,847	+		Synpcc7942_1294	0.71	+0.2
1,319,849	+		Synpcc7942_1294	0.71	+0.7
1,319,849	-				-0.8
1,319,852	+		Synpcc7942_1294	0.71	-1.1
1,319,855	-		Synpcc7942_1294	0.71	-0.5
1,319,855	-		Synpcc7942_1294	0.71	+0.4
1,319,855	-		Synpcc7942_1294	0.71	+0.0
1,319,860	-		Synpcc7942_1294	0.72	+2.0
1,319,865	-		Synpcc7942_1294	0.72	+0.5
1,319,872	+		Synpcc7942_1294	0.73	+3.4
1,319,880	-		Synpcc7942_1294	0.73	-0.4
1,319,913	-		Synpcc7942_1294	0.75	-0.9
1,320,024	+		Synpcc7942_1294	0.82	+0.7
1,320,024	+		Synpcc7942_1294	0.82	-0.2
1,320,024	+		Synpcc7942_1294	0.82	-0.9
1,320,024	+		Synpcc7942_1294	0.82	-0.3
1,320,024	+		Synpcc7942_1294	0.82	-0.6
1,320,024	+		Synpcc7942_1294	0.82	-1.4
1,320,026	+		Synpcc7942_1294	0.82	-0.4
1,320,032	-		Synpcc7942_1294	0.83	-1.2
1,320,032	-		Synpcc7942_1294	0.83	-1.5
1,320,032	-		Synpcc7942_1294	0.83	-0.7
1,320,032	-		Synpcc7942_1294	0.83	-0.7
1,320,032	-		Synpcc7942_1294	0.83	-1.9
1,320,032	-		Synpcc7942_1294	0.83	+1.0
1,320,032	-		Synpcc7942_1294	0.83	-0.4
1,320,032	-		Synpcc7942_1294	0.83	-1.2
1,320,050	+		Synpcc7942_1294	0.84	-1.1
1,320,144	+		Synpcc7942_1294	0.90	+0.4
1,320,144	+		Synpcc7942_1294	0.90	-0.4
1,320,152	-				+1.0
1,320,152	-				-1.0
1,320,159	+				-1.6
1,320,169	+				-0.8
1,320,197	-				-1.5
1,320,199	+				-1.6
1,320,207	-				-0.0
1,320,214	+				-0.6
1,320,214	+				-0.6
1,320,221	+				+0.5
1,320,222	-				-0.5
1,320,222	-				+1.0
1,320,226	+				+1.0
1,320,229	-				+0.4
1,320,236	+				-0.9
1,320,310	+				-1.4
1,320,312	+				+0.2
1,320,312	+				+0.5
1,320,324	+				+0.4
1,320,326	+				-0.6
1,320,354	+				+2.0
1,320,357	+				+0.4
1,320,357	+				-0.6
1,320,362	-				+1.4
1,320,367	+				-1.0
1,320,371	+				-1.4
1,320,404	+				+1.0
1,320,409	+				-0.7
1,320,422	-				-0.1
1,320,468	-				+2.0
1,320,525	+		Synpcc7942_1295	0.11	-0.5
1,320,525	+		Synpcc7942_1295	0.11	-1.1
1,320,542	+		Synpcc7942_1295	0.12	+1.0
1,320,545	-		Synpcc7942_1295	0.13	-0.3
1,320,552	+		Synpcc7942_1295	0.13	-2.3
1,320,580	+		Synpcc7942_1295	0.15	-2.4
1,320,601	+		Synpcc7942_1295	0.17	+0.2
1,320,657	+		Synpcc7942_1295	0.21	+1.0
1,320,657	+		Synpcc7942_1295	0.21	-1.4
1,320,667	+		Synpcc7942_1295	0.21	-1.6
1,320,675	-		Synpcc7942_1295	0.22	-0.9
1,320,675	-		Synpcc7942_1295	0.22	-1.3
1,320,675	-		Synpcc7942_1295	0.22	+1.0
1,320,715	+		Synpcc7942_1295	0.25	-0.8
1,320,728	+		Synpcc7942_1295	0.26	-0.5
1,320,728	+		Synpcc7942_1295	0.26	-1.6
1,320,738	+		Synpcc7942_1295	0.26	+1.2
1,320,739	+		Synpcc7942_1295	0.27	-2.0
1,320,763	+		Synpcc7942_1295	0.28	-1.6
1,320,777	+		Synpcc7942_1295	0.29	+1.0
1,320,809	+		Synpcc7942_1295	0.32	+1.0
1,320,865	+		Synpcc7942_1295	0.36	+1.8
1,320,875	-		Synpcc7942_1295	0.36	-1.6
1,320,893	-		Synpcc7942_1295	0.38	+0.0
1,320,930	+		Synpcc7942_1295	0.40	-1.2
1,320,931	-		Synpcc7942_1295	0.40	+0.0
1,320,938	-		Synpcc7942_1295	0.41	+2.4
1,320,938	-		Synpcc7942_1295	0.41	-1.1
1,320,938	-		Synpcc7942_1295	0.41	+0.0
1,320,938	-		Synpcc7942_1295	0.41	-2.6
1,320,938	-		Synpcc7942_1295	0.41	+1.0
1,320,943	+		Synpcc7942_1295	0.41	+0.4
1,320,974	+		Synpcc7942_1295	0.43	-0.7
1,321,010	+		Synpcc7942_1295	0.46	-0.4
1,321,045	+		Synpcc7942_1295	0.49	+1.0
1,321,054	-		Synpcc7942_1295	0.49	-1.8
1,321,054	-		Synpcc7942_1295	0.49	+0.6
1,321,054	-		Synpcc7942_1295	0.49	+1.0
1,321,062	+		Synpcc7942_1295	0.50	-0.8
1,321,062	+		Synpcc7942_1295	0.50	-0.1
1,321,070	-		Synpcc7942_1295	0.50	-2.0
1,321,070	-		Synpcc7942_1295	0.50	-3.3
1,321,071	-		Synpcc7942_1295	0.50	-0.7
1,321,071	-		Synpcc7942_1295	0.50	+0.4
1,321,074	+		Synpcc7942_1295	0.51	+0.7
1,321,077	-		Synpcc7942_1295	0.51	-1.1
1,321,083	-		Synpcc7942_1295	0.51	-1.0
1,321,130	+		Synpcc7942_1295	0.55	+0.8
1,321,130	+		Synpcc7942_1295	0.55	+1.0
1,321,138	-		Synpcc7942_1295	0.55	-0.6
1,321,161	-		Synpcc7942_1295	0.57	-0.9
1,321,161	-		Synpcc7942_1295	0.57	+1.7
1,321,164	+		Synpcc7942_1295	0.57	-0.0
1,321,188	+		Synpcc7942_1295	0.59	+0.2
1,321,196	-		Synpcc7942_1295	0.59	+1.0
1,321,262	-		Synpcc7942_1295	0.64	-1.1
1,321,269	+		Synpcc7942_1295	0.65	-0.6