Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1292

Experiment: Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1
1,312,962	+	pmbA	Synpcc7942_1289	0.84	-0.6
1,312,970	-	pmbA	Synpcc7942_1289	0.84	+0.0
1,313,080	+				+2.0
1,313,085	+				+0.0
1,313,118	+				-0.8
1,313,126	-				+1.0
1,313,151	+				+0.0
1,313,182	+				+1.0
1,313,182	+				-0.7
1,313,184	+				+1.0
1,313,185	+				-1.2
1,313,185	+				-0.2
1,313,193	-				+0.8
1,313,193	-				+1.0
1,313,193	-				-1.0
1,313,193	-				+1.5
1,313,198	+				+0.6
1,313,206	-				+0.3
1,313,230	+				-1.1
1,313,252	-				-1.3
1,313,291	-				+1.0
1,313,356	+	smtA	Synpcc7942_1290	0.39	-2.0
1,313,366	+	smtA	Synpcc7942_1290	0.44	+1.0
1,313,370	+	smtA	Synpcc7942_1290	0.47	+1.0
1,313,371	+	smtA	Synpcc7942_1290	0.47	-2.8
1,313,416	-				-0.2
1,313,424	+	smtA	Synpcc7942_1290	0.78	-2.6
1,313,440	+	smtA	Synpcc7942_1290	0.88	+1.0
1,313,455	+				+1.0
1,313,457	-				+1.0
1,313,563	+				+0.0
1,313,586	+				-0.6
1,313,589	-				+1.0
1,313,594	+				+0.2
1,313,625	+	smtB	Synpcc7942_1291	0.17	+0.5
1,313,665	-	smtB	Synpcc7942_1291	0.28	+0.0
1,313,684	+	smtB	Synpcc7942_1291	0.33	+0.0
1,313,692	-	smtB	Synpcc7942_1291	0.36	+1.4
1,313,716	+	smtB	Synpcc7942_1291	0.42	-0.9
1,313,716	+	smtB	Synpcc7942_1291	0.42	+1.0
1,313,716	+	smtB	Synpcc7942_1291	0.42	-0.3
1,313,716	+	smtB	Synpcc7942_1291	0.42	+0.0
1,313,737	+	smtB	Synpcc7942_1291	0.48	-0.3
1,313,740	+	smtB	Synpcc7942_1291	0.49	+0.0
1,313,750	-	smtB	Synpcc7942_1291	0.51	-0.1
1,313,761	+	smtB	Synpcc7942_1291	0.54	+0.4
1,313,763	+	smtB	Synpcc7942_1291	0.55	+1.0
1,313,814	+	smtB	Synpcc7942_1291	0.69	+1.0
1,313,852	+	smtB	Synpcc7942_1291	0.79	+0.0
1,313,852	+	smtB	Synpcc7942_1291	0.79	+2.6
1,313,857	+	smtB	Synpcc7942_1291	0.80	-0.3
1,313,860	-	smtB	Synpcc7942_1291	0.81	-0.6
1,313,878	-	smtB	Synpcc7942_1291	0.86	-0.3
1,313,936	+				+1.0
1,313,937	+				+1.0
1,313,977	+				+1.0
1,313,977	+				-0.6
1,313,979	+				-1.2
1,313,984	+				-1.6
1,313,985	-				+1.5
1,314,002	-				+0.6
1,314,007	-				-0.7
1,316,029	+				+0.4
1,316,046	-				+1.0
1,316,069	-				-0.3
1,316,071	+				-2.0
1,316,079	-				+0.4
1,316,138	+				+2.0
1,316,139	-				+0.6
1,316,153	+				-0.3
1,316,161	+				+3.0
1,316,161	-				+1.0
1,316,161	-				-1.1
1,316,163	+				+0.0
1,316,163	+				+0.1
1,316,170	-				-1.1
1,316,170	-				-0.4
1,316,170	-				-0.1
1,316,170	-				+3.4
1,316,171	-				+2.0