Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1279

Experiment: Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1
1,300,831	+				+1.0
1,300,831	+	gtrC	Synpcc7942_1276	0.57	+1.0
1,300,831	+	gtrC	Synpcc7942_1276	0.57	-0.6
1,300,839	-	gtrC	Synpcc7942_1276	0.58	+1.0
1,300,887	-	gtrC	Synpcc7942_1276	0.65	+1.0
1,300,962	+	gtrC	Synpcc7942_1276	0.74	+1.6
1,300,963	+	gtrC	Synpcc7942_1276	0.74	-1.8
1,300,970	-				+0.3
1,301,005	+	gtrC	Synpcc7942_1276	0.80	+0.0
1,301,008	-	gtrC	Synpcc7942_1276	0.80	-1.1
1,301,037	+	gtrC	Synpcc7942_1276	0.84	+1.0
1,301,045	-	gtrC	Synpcc7942_1276	0.85	-2.9
1,301,200	-				+0.3
1,301,576	+				+1.0
1,301,816	+				-1.4
1,301,817	+				+0.4
1,301,817	+				-1.0
1,301,843	+		Synpcc7942_1279	0.19	+0.0
1,301,846	-		Synpcc7942_1279	0.20	-0.1
1,301,851	-		Synpcc7942_1279	0.22	-1.1
1,301,930	-		Synpcc7942_1279	0.53	-1.6
1,301,949	+		Synpcc7942_1279	0.61	-0.6
1,301,949	+		Synpcc7942_1279	0.61	-1.0
1,301,957	-		Synpcc7942_1279	0.64	-1.4
1,301,957	-		Synpcc7942_1279	0.64	-1.3
1,301,957	-		Synpcc7942_1279	0.64	-0.6
1,301,968	-		Synpcc7942_1279	0.68	-0.7
1,301,977	-		Synpcc7942_1279	0.72	-1.3
1,301,977	-		Synpcc7942_1279	0.72	+0.5
1,302,013	+		Synpcc7942_1279	0.86	-1.1
1,302,021	-		Synpcc7942_1279	0.89	-0.6
1,302,021	-		Synpcc7942_1279	0.89	-1.8
1,302,022	-				+1.0
1,302,026	+				-0.6
1,302,032	+				-0.6
1,302,032	+				-0.6
1,302,034	-				-1.4
1,302,072	-				+0.2
1,302,110	-				-0.8
1,302,112	+				-0.3
1,302,118	-				+2.6
1,302,124	+				-1.0
1,302,142	+				-0.6
1,302,142	+				-0.2
1,302,155	+		Synpcc7942_1280	0.10	+0.1
1,302,192	-		Synpcc7942_1280	0.14	-0.7
1,302,196	+		Synpcc7942_1280	0.14	-0.5
1,302,196	+		Synpcc7942_1280	0.14	+1.6
1,302,196	+		Synpcc7942_1280	0.14	-1.1
1,302,196	+		Synpcc7942_1280	0.14	+0.2
1,302,204	+		Synpcc7942_1280	0.15	+2.3
1,302,204	-		Synpcc7942_1280	0.15	+0.0
1,302,204	-		Synpcc7942_1280	0.15	+1.7
1,302,204	-		Synpcc7942_1280	0.15	-0.7
1,302,204	-		Synpcc7942_1280	0.15	+0.9
1,302,204	-		Synpcc7942_1280	0.15	-1.8
1,302,204	-		Synpcc7942_1280	0.15	-1.7
1,302,204	-		Synpcc7942_1280	0.15	-1.2
1,302,209	+		Synpcc7942_1280	0.15	+0.0
1,302,212	-		Synpcc7942_1280	0.15	-1.2
1,302,221	-		Synpcc7942_1280	0.16	-0.6
1,302,232	+		Synpcc7942_1280	0.17	-0.7
1,302,245	+		Synpcc7942_1280	0.18	-1.2
1,302,264	+		Synpcc7942_1280	0.20	+1.0
1,302,272	-		Synpcc7942_1280	0.21	-1.3
1,302,274	+		Synpcc7942_1280	0.21	-1.4
1,302,275	+		Synpcc7942_1280	0.21	+1.0
1,302,280	+		Synpcc7942_1280	0.22	-0.2
1,302,283	-		Synpcc7942_1280	0.22	-0.3
1,302,287	+		Synpcc7942_1280	0.22	-1.1
1,302,319	+		Synpcc7942_1280	0.25	-0.2
1,302,343	+		Synpcc7942_1280	0.27	-0.6
1,302,344	+		Synpcc7942_1280	0.27	-1.0
1,302,352	-		Synpcc7942_1280	0.28	-0.8
1,302,363	+		Synpcc7942_1280	0.29	+2.0
1,302,367	+				-0.3
1,302,427	+		Synpcc7942_1280	0.35	-0.9
1,302,435	-		Synpcc7942_1280	0.36	+0.6
1,302,436	+		Synpcc7942_1280	0.36	-0.6
1,302,444	-		Synpcc7942_1280	0.37	+0.4
1,302,455	-		Synpcc7942_1280	0.38	+1.3
1,302,455	-		Synpcc7942_1280	0.38	+3.0
1,302,511	+		Synpcc7942_1280	0.43	-0.8
1,302,517	+		Synpcc7942_1280	0.43	-2.9
1,302,519	-		Synpcc7942_1280	0.43	-0.3
1,302,538	-		Synpcc7942_1280	0.45	-0.7
1,302,551	+		Synpcc7942_1280	0.46	-1.1
1,302,554	-		Synpcc7942_1280	0.47	-0.3
1,302,579	+		Synpcc7942_1280	0.49	-0.9
1,302,579	+		Synpcc7942_1280	0.49	-1.6
1,302,579	+		Synpcc7942_1280	0.49	-0.1
1,302,579	+		Synpcc7942_1280	0.49	-0.7
1,302,579	+		Synpcc7942_1280	0.49	-0.6
1,302,579	+		Synpcc7942_1280	0.49	-0.7
1,302,579	+		Synpcc7942_1280	0.49	-1.0
1,302,579	+		Synpcc7942_1280	0.49	+0.0
1,302,581	+		Synpcc7942_1280	0.49	+1.0
1,302,582	-		Synpcc7942_1280	0.49	+1.0
1,302,587	-		Synpcc7942_1280	0.50	-1.0
1,302,587	-		Synpcc7942_1280	0.50	-0.3
1,302,587	-		Synpcc7942_1280	0.50	-2.0
1,302,587	-		Synpcc7942_1280	0.50	-1.7
1,302,587	-		Synpcc7942_1280	0.50	-0.8
1,302,592	-		Synpcc7942_1280	0.50	-1.5
1,302,638	+		Synpcc7942_1280	0.54	+1.0
1,302,640	-		Synpcc7942_1280	0.54	-2.2
1,302,645	-		Synpcc7942_1280	0.55	+1.0
1,302,648	+		Synpcc7942_1280	0.55	-1.7
1,302,648	+		Synpcc7942_1280	0.55	-1.2
1,302,648	+		Synpcc7942_1280	0.55	-0.0
1,302,651	-		Synpcc7942_1280	0.55	+0.1
1,302,653	+		Synpcc7942_1280	0.56	-0.3
1,302,653	+		Synpcc7942_1280	0.56	-1.7
1,302,653	+		Synpcc7942_1280	0.56	+0.9
1,302,656	-		Synpcc7942_1280	0.56	-0.3
1,302,658	+		Synpcc7942_1280	0.56	+0.5
1,302,699	-		Synpcc7942_1280	0.60	-0.6
1,302,709	+		Synpcc7942_1280	0.61	+0.8
1,302,723	+		Synpcc7942_1280	0.62	-0.7
1,302,731	-		Synpcc7942_1280	0.63	-1.3
1,302,731	-		Synpcc7942_1280	0.63	+0.0
1,302,733	+		Synpcc7942_1280	0.63	-0.7
1,302,741	-		Synpcc7942_1280	0.64	+1.8
1,302,745	+		Synpcc7942_1280	0.64	+0.0
1,302,763	-		Synpcc7942_1280	0.66	-0.7
1,302,763	-		Synpcc7942_1280	0.66	-0.5
1,302,763	-		Synpcc7942_1280	0.66	-0.3
1,302,773	+		Synpcc7942_1280	0.67	+1.0
1,302,781	-		Synpcc7942_1280	0.67	-1.0
1,302,781	-		Synpcc7942_1280	0.67	+0.0
1,302,801	-		Synpcc7942_1280	0.69	-0.6
1,302,803	-		Synpcc7942_1280	0.69	+0.0
1,302,811	+		Synpcc7942_1280	0.70	+1.0
1,302,825	+		Synpcc7942_1280	0.71	-1.1
1,302,825	+		Synpcc7942_1280	0.71	+1.0
1,302,831	-		Synpcc7942_1280	0.72	-0.4
1,302,831	-		Synpcc7942_1280	0.72	+1.0
1,302,831	-		Synpcc7942_1280	0.72	+2.3
1,302,832	-		Synpcc7942_1280	0.72	-0.4
1,302,862	-		Synpcc7942_1280	0.75	+1.0
1,302,863	+		Synpcc7942_1280	0.75	+0.0
1,302,869	+		Synpcc7942_1280	0.75	+0.7
1,302,874	+		Synpcc7942_1280	0.76	-1.6
1,302,936	-		Synpcc7942_1280	0.81	-1.0
1,302,951	+		Synpcc7942_1280	0.83	-0.6
1,302,965	+		Synpcc7942_1280	0.84	-0.3
1,302,973	-		Synpcc7942_1280	0.85	+1.0
1,302,992	+		Synpcc7942_1280	0.87	-2.6
1,302,993	+		Synpcc7942_1280	0.87	-0.7
1,302,997	+		Synpcc7942_1280	0.87	+1.4
1,303,000	-		Synpcc7942_1280	0.87	+0.4
1,303,000	-		Synpcc7942_1280	0.87	-0.8
1,303,005	-		Synpcc7942_1280	0.88	-1.1
1,303,005	-		Synpcc7942_1280	0.88	-0.4
1,303,006	+		Synpcc7942_1280	0.88	-0.3
1,303,010	-		Synpcc7942_1280	0.88	-0.0