Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1136

Experiment: Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1
1,157,143	-				+0.7
1,157,401	+				-0.9
1,157,401	+				-1.2
1,157,409	-				-0.1
1,157,409	-				-0.0
1,157,419	-				+0.5
1,157,445	+				+2.1
1,157,445	-				-0.3
1,157,451	+				-0.8
1,157,453	-				+1.6
1,157,456	+				+1.1
1,157,461	+				+1.1
1,157,461	+				-0.9
1,157,469	-		Synpcc7942_1135	0.11	+0.1
1,157,493	+		Synpcc7942_1135	0.15	-0.8
1,157,498	-		Synpcc7942_1135	0.16	-0.3
1,157,501	-		Synpcc7942_1135	0.17	-1.8
1,157,514	+		Synpcc7942_1135	0.19	+0.4
1,157,520	+		Synpcc7942_1135	0.21	+1.1
1,157,520	+		Synpcc7942_1135	0.21	-0.9
1,157,520	+		Synpcc7942_1135	0.21	+0.2
1,157,520	+		Synpcc7942_1135	0.21	+0.1
1,157,520	+		Synpcc7942_1135	0.21	-1.0
1,157,520	+		Synpcc7942_1135	0.21	+1.1
1,157,520	+		Synpcc7942_1135	0.21	+1.1
1,157,520	+		Synpcc7942_1135	0.21	+2.1
1,157,522	-		Synpcc7942_1135	0.21	+1.1
1,157,525	+		Synpcc7942_1135	0.22	-1.1
1,157,528	-		Synpcc7942_1135	0.22	-0.8
1,157,528	-		Synpcc7942_1135	0.22	-0.9
1,157,528	-		Synpcc7942_1135	0.22	-0.3
1,157,563	-		Synpcc7942_1135	0.29	-0.3
1,157,600	+		Synpcc7942_1135	0.36	-0.5
1,157,600	+		Synpcc7942_1135	0.36	-0.5
1,157,608	-		Synpcc7942_1135	0.38	+1.1
1,157,608	-		Synpcc7942_1135	0.38	-2.5
1,157,612	+		Synpcc7942_1135	0.38	+0.5
1,157,620	-		Synpcc7942_1135	0.40	+1.1
1,157,622	+		Synpcc7942_1135	0.40	+1.1
1,157,622	+		Synpcc7942_1135	0.40	-0.5
1,157,637	+		Synpcc7942_1135	0.43	+0.9
1,157,657	-		Synpcc7942_1135	0.47	+0.1
1,157,657	-		Synpcc7942_1135	0.47	-0.9
1,157,683	+		Synpcc7942_1135	0.52	-0.3
1,157,709	+		Synpcc7942_1135	0.57	+1.1
1,157,714	+		Synpcc7942_1135	0.58	-1.3
1,157,714	+		Synpcc7942_1135	0.58	-0.4
1,157,714	+		Synpcc7942_1135	0.58	+0.1
1,157,775	-		Synpcc7942_1135	0.70	+1.1
1,157,776	-		Synpcc7942_1135	0.70	-0.6
1,157,807	+		Synpcc7942_1135	0.76	+0.1
1,157,807	+		Synpcc7942_1135	0.76	+1.1
1,157,807	+		Synpcc7942_1135	0.76	-1.0
1,157,807	+		Synpcc7942_1135	0.76	-1.4
1,157,807	+		Synpcc7942_1135	0.76	-1.1
1,157,808	-		Synpcc7942_1135	0.76	-0.4
1,157,813	-		Synpcc7942_1135	0.77	-0.6
1,157,813	-		Synpcc7942_1135	0.77	+1.6
1,157,815	-		Synpcc7942_1135	0.77	+0.8
1,157,815	-		Synpcc7942_1135	0.77	-0.7
1,157,815	-		Synpcc7942_1135	0.77	+1.1
1,157,815	-		Synpcc7942_1135	0.77	-0.6
1,157,817	+		Synpcc7942_1135	0.78	-0.5
1,157,850	+		Synpcc7942_1135	0.84	-0.2
1,157,893	-				-0.5
1,157,938	-				-0.8
1,157,941	+				-1.1
1,157,956	+				-0.8
1,157,963	+				+0.2
1,157,971	-				+1.1
1,157,979	-				-0.3
1,157,979	-				-1.5
1,157,991	-				-1.6
1,157,995	-				+1.1
1,158,003	-				+1.1
1,158,016	-				-0.9
1,158,030	-				+0.1
1,158,031	+				+1.6
1,158,058	+				-2.1
1,158,066	-				+0.4
1,158,066	-				+1.1
1,158,082	+				+0.1
1,158,082	+				-1.6
1,158,092	+				-1.2
1,158,092	+				+0.1
1,158,105	-				+0.1
1,158,150	-				-0.9
1,158,193	+				+0.7
1,158,201	-				-0.2
1,158,206	+				+0.7
1,158,206	+				+0.9
1,158,214	-				+0.1
1,158,214	-				+3.1
1,158,226	+				-1.5
1,158,227	+				-0.5
1,158,263	+				+0.1
1,158,271	-				-1.3
1,158,280	-				-0.7
1,158,280	-				+0.1
1,158,280	-				+0.5
1,158,316	-	pepN	Synpcc7942_1136	0.11	+2.6
1,158,318	-	pepN	Synpcc7942_1136	0.11	-0.9
1,158,343	+	pepN	Synpcc7942_1136	0.12	+1.1
1,158,352	-	pepN	Synpcc7942_1136	0.13	-0.4
1,158,368	+	pepN	Synpcc7942_1136	0.13	+1.1
1,158,420	-	pepN	Synpcc7942_1136	0.15	-1.3
1,158,420	-	pepN	Synpcc7942_1136	0.15	-2.3
1,158,420	-	pepN	Synpcc7942_1136	0.15	+0.6
1,158,422	+	pepN	Synpcc7942_1136	0.15	-1.6
1,158,436	+	pepN	Synpcc7942_1136	0.16	-0.5
1,158,439	-	pepN	Synpcc7942_1136	0.16	-2.9
1,158,455	+	pepN	Synpcc7942_1136	0.16	-0.5
1,158,455	+	pepN	Synpcc7942_1136	0.16	-1.0
1,158,455	+	pepN	Synpcc7942_1136	0.16	+1.1
1,158,458	-	pepN	Synpcc7942_1136	0.17	-0.2
1,158,463	-	pepN	Synpcc7942_1136	0.17	-2.1
1,158,463	-	pepN	Synpcc7942_1136	0.17	-1.3
1,158,463	-	pepN	Synpcc7942_1136	0.17	-2.1
1,158,463	-	pepN	Synpcc7942_1136	0.17	+0.3
1,158,467	+	pepN	Synpcc7942_1136	0.17	+1.1
1,158,474	+	pepN	Synpcc7942_1136	0.17	+1.1
1,158,482	-	pepN	Synpcc7942_1136	0.18	-1.6
1,158,488	-	pepN	Synpcc7942_1136	0.18	-1.1
1,158,511	+				+0.3
1,158,519	-	pepN	Synpcc7942_1136	0.19	+1.0
1,158,551	+	pepN	Synpcc7942_1136	0.20	-0.9
1,158,551	+	pepN	Synpcc7942_1136	0.20	-1.3
1,158,551	+	pepN	Synpcc7942_1136	0.20	+1.0
1,158,551	+	pepN	Synpcc7942_1136	0.20	-1.7
1,158,551	+	pepN	Synpcc7942_1136	0.20	-0.9
1,158,559	-	pepN	Synpcc7942_1136	0.20	-2.0
1,158,559	-	pepN	Synpcc7942_1136	0.20	-1.3
1,158,641	+	pepN	Synpcc7942_1136	0.24	-0.8
1,158,642	-	pepN	Synpcc7942_1136	0.24	+1.4
1,158,664	+	pepN	Synpcc7942_1136	0.25	-2.0
1,158,664	+	pepN	Synpcc7942_1136	0.25	-0.3
1,158,695	-	pepN	Synpcc7942_1136	0.26	-0.5
1,158,717	-	pepN	Synpcc7942_1136	0.27	+1.0
1,158,747	+	pepN	Synpcc7942_1136	0.28	-0.4
1,158,761	-	pepN	Synpcc7942_1136	0.28	-1.0
1,158,775	-	pepN	Synpcc7942_1136	0.29	-1.3
1,158,805	+	pepN	Synpcc7942_1136	0.30	+1.2
1,158,816	+	pepN	Synpcc7942_1136	0.30	-0.5
1,158,824	-	pepN	Synpcc7942_1136	0.31	+0.5
1,158,831	-	pepN	Synpcc7942_1136	0.31	-0.5
1,158,837	+	pepN	Synpcc7942_1136	0.31	-0.7
1,158,837	+	pepN	Synpcc7942_1136	0.31	+1.0
1,158,837	+	pepN	Synpcc7942_1136	0.31	-2.5
1,158,837	+	pepN	Synpcc7942_1136	0.31	-1.5
1,158,842	+	pepN	Synpcc7942_1136	0.31	-1.5
1,158,845	-	pepN	Synpcc7942_1136	0.31	-1.0
1,158,845	-	pepN	Synpcc7942_1136	0.31	-0.8
1,158,847	+	pepN	Synpcc7942_1136	0.32	-0.5
1,158,849	+	pepN	Synpcc7942_1136	0.32	+1.0
1,158,855	-	pepN	Synpcc7942_1136	0.32	-1.2
1,158,871	+	pepN	Synpcc7942_1136	0.32	-0.5
1,158,893	+	pepN	Synpcc7942_1136	0.33	-0.5
1,158,894	+	pepN	Synpcc7942_1136	0.33	-2.9
1,158,894	+	pepN	Synpcc7942_1136	0.33	-1.1
1,158,894	+	pepN	Synpcc7942_1136	0.33	+0.5
1,158,894	+	pepN	Synpcc7942_1136	0.33	-0.8
1,158,894	+	pepN	Synpcc7942_1136	0.33	-0.7
1,158,941	+	pepN	Synpcc7942_1136	0.35	+2.0
1,158,946	+	pepN	Synpcc7942_1136	0.35	-0.5
1,158,946	+	pepN	Synpcc7942_1136	0.35	-1.3
1,158,964	+	pepN	Synpcc7942_1136	0.36	+1.0
1,158,964	+	pepN	Synpcc7942_1136	0.36	-0.5
1,158,988	-	pepN	Synpcc7942_1136	0.37	-2.4
1,159,017	+	pepN	Synpcc7942_1136	0.38	+0.0
1,159,025	-	pepN	Synpcc7942_1136	0.38	-0.5
1,159,027	+	pepN	Synpcc7942_1136	0.38	+0.0
1,159,037	+	pepN	Synpcc7942_1136	0.39	+1.6
1,159,042	+	pepN	Synpcc7942_1136	0.39	+0.5
1,159,045	-	pepN	Synpcc7942_1136	0.39	+1.5
1,159,079	-	pepN	Synpcc7942_1136	0.40	-1.4
1,159,084	+	pepN	Synpcc7942_1136	0.41	-1.7
1,159,084	+	pepN	Synpcc7942_1136	0.41	+0.0
1,159,086	+	pepN	Synpcc7942_1136	0.41	+0.0
1,159,086	+	pepN	Synpcc7942_1136	0.41	-1.9
1,159,087	-	pepN	Synpcc7942_1136	0.41	-0.8
1,159,094	-	pepN	Synpcc7942_1136	0.41	-0.5
1,159,098	+	pepN	Synpcc7942_1136	0.41	+0.0
1,159,111	+	pepN	Synpcc7942_1136	0.42	+0.5
1,159,168	+	pepN	Synpcc7942_1136	0.44	+0.7
1,159,183	-	pepN	Synpcc7942_1136	0.44	+0.0
1,159,183	-	pepN	Synpcc7942_1136	0.44	-1.5
1,159,183	-	pepN	Synpcc7942_1136	0.44	+0.0
1,159,203	-	pepN	Synpcc7942_1136	0.45	+0.6
1,159,237	+	pepN	Synpcc7942_1136	0.47	-2.0
1,159,257	-	pepN	Synpcc7942_1136	0.47	+0.0
1,159,257	-	pepN	Synpcc7942_1136	0.47	+0.0
1,159,257	-	pepN	Synpcc7942_1136	0.47	+1.0
1,159,257	-	pepN	Synpcc7942_1136	0.47	-0.5
1,159,261	+	pepN	Synpcc7942_1136	0.47	+0.0
1,159,261	+	pepN	Synpcc7942_1136	0.47	+0.5
1,159,262	-	pepN	Synpcc7942_1136	0.48	+1.0
1,159,269	-	pepN	Synpcc7942_1136	0.48	-1.8
1,159,276	-	pepN	Synpcc7942_1136	0.48	-2.0
1,159,296	+	pepN	Synpcc7942_1136	0.49	+1.0
1,159,296	+	pepN	Synpcc7942_1136	0.49	+0.0
1,159,311	+	pepN	Synpcc7942_1136	0.49	+0.3
1,159,335	-	pepN	Synpcc7942_1136	0.50	-0.7
1,159,345	+	pepN	Synpcc7942_1136	0.51	+1.6
1,159,345	+	pepN	Synpcc7942_1136	0.51	-1.0
1,159,345	+	pepN	Synpcc7942_1136	0.51	+1.6
1,159,345	+	pepN	Synpcc7942_1136	0.51	+1.0
1,159,345	+	pepN	Synpcc7942_1136	0.51	-0.4
1,159,345	-	pepN	Synpcc7942_1136	0.51	-2.3
1,159,348	-	pepN	Synpcc7942_1136	0.51	+0.0
1,159,353	-	pepN	Synpcc7942_1136	0.51	+0.0
1,159,353	-	pepN	Synpcc7942_1136	0.51	-1.5
1,159,353	-	pepN	Synpcc7942_1136	0.51	-2.5
1,159,358	-	pepN	Synpcc7942_1136	0.51	-0.2
1,159,389	-	pepN	Synpcc7942_1136	0.52	-1.1
1,159,397	+	pepN	Synpcc7942_1136	0.53	+1.0
1,159,470	+	pepN	Synpcc7942_1136	0.56	+0.0
1,159,470	-	pepN	Synpcc7942_1136	0.56	-1.8
1,159,471	-	pepN	Synpcc7942_1136	0.56	-1.1
1,159,471	-	pepN	Synpcc7942_1136	0.56	-1.5
1,159,493	+	pepN	Synpcc7942_1136	0.56	-1.5
1,159,493	+	pepN	Synpcc7942_1136	0.56	-0.5
1,159,493	+	pepN	Synpcc7942_1136	0.56	-1.5
1,159,510	+	pepN	Synpcc7942_1136	0.57	+1.0
1,159,518	-	pepN	Synpcc7942_1136	0.57	+0.0
1,159,605	+	pepN	Synpcc7942_1136	0.61	-0.3
1,159,605	+	pepN	Synpcc7942_1136	0.61	-2.0
1,159,612	+	pepN	Synpcc7942_1136	0.61	-1.6
1,159,621	-	pepN	Synpcc7942_1136	0.61	-0.5
1,159,659	-	pepN	Synpcc7942_1136	0.63	-1.2
1,159,659	-	pepN	Synpcc7942_1136	0.63	+1.6
1,159,659	-	pepN	Synpcc7942_1136	0.63	+0.0
1,159,659	-	pepN	Synpcc7942_1136	0.63	-0.5
1,159,673	+	pepN	Synpcc7942_1136	0.63	-2.0
1,159,722	+	pepN	Synpcc7942_1136	0.65	+0.0
1,159,751	+	pepN	Synpcc7942_1136	0.66	+2.5
1,159,752	+	pepN	Synpcc7942_1136	0.66	-2.8
1,159,762	+	pepN	Synpcc7942_1136	0.67	-2.4
1,159,786	+	pepN	Synpcc7942_1136	0.68	+0.4
1,159,832	+	pepN	Synpcc7942_1136	0.69	+1.4
1,159,832	+	pepN	Synpcc7942_1136	0.69	+2.3
1,159,832	+	pepN	Synpcc7942_1136	0.69	-1.0
1,159,863	+	pepN	Synpcc7942_1136	0.71	-0.1
1,159,873	+	pepN	Synpcc7942_1136	0.71	+1.0
1,159,879	+	pepN	Synpcc7942_1136	0.71	-0.4
1,159,887	-	pepN	Synpcc7942_1136	0.72	+0.0
1,159,904	+	pepN	Synpcc7942_1136	0.72	+0.0
1,159,904	+	pepN	Synpcc7942_1136	0.72	-0.2
1,159,904	+	pepN	Synpcc7942_1136	0.72	-2.1
1,159,912	-				+0.0
1,159,912	-	pepN	Synpcc7942_1136	0.73	+1.0
1,159,912	-	pepN	Synpcc7942_1136	0.73	-2.0
1,159,912	-	pepN	Synpcc7942_1136	0.73	+1.0
1,159,912	-	pepN	Synpcc7942_1136	0.73	+1.0
1,159,912	-	pepN	Synpcc7942_1136	0.73	+0.0
1,159,949	+	pepN	Synpcc7942_1136	0.74	-0.5
1,159,957	-	pepN	Synpcc7942_1136	0.74	+0.0
1,159,993	-	pepN	Synpcc7942_1136	0.76	-0.5
1,160,027	+	pepN	Synpcc7942_1136	0.77	+0.0
1,160,027	+	pepN	Synpcc7942_1136	0.77	+0.0
1,160,035	-	pepN	Synpcc7942_1136	0.77	-1.4
1,160,068	-	pepN	Synpcc7942_1136	0.79	-1.0
1,160,073	+	pepN	Synpcc7942_1136	0.79	-0.1
1,160,100	-	pepN	Synpcc7942_1136	0.80	+0.1
1,160,120	+	pepN	Synpcc7942_1136	0.81	-0.5
1,160,120	+	pepN	Synpcc7942_1136	0.81	-1.0
1,160,126	-	pepN	Synpcc7942_1136	0.81	-0.5
1,160,130	+	pepN	Synpcc7942_1136	0.81	-0.3
1,160,152	+	pepN	Synpcc7942_1136	0.82	+1.0
1,160,153	+	pepN	Synpcc7942_1136	0.82	+1.0
1,160,153	+	pepN	Synpcc7942_1136	0.82	-0.7
1,160,161	-	pepN	Synpcc7942_1136	0.82	-0.8
1,160,161	-	pepN	Synpcc7942_1136	0.82	+0.0
1,160,163	-	pepN	Synpcc7942_1136	0.82	-0.5
1,160,184	-	pepN	Synpcc7942_1136	0.83	-1.1
1,160,222	-	pepN	Synpcc7942_1136	0.84	+1.0
1,160,223	-	pepN	Synpcc7942_1136	0.85	-1.0
1,160,223	-	pepN	Synpcc7942_1136	0.85	-3.3
1,160,223	-	pepN	Synpcc7942_1136	0.85	-0.5
1,160,246	-	pepN	Synpcc7942_1136	0.85	-1.8
1,160,260	-	pepN	Synpcc7942_1136	0.86	-0.5
1,160,337	+	pepN	Synpcc7942_1136	0.89	-0.6
1,160,350	+	pepN	Synpcc7942_1136	0.89	-1.0
1,160,358	-	pepN	Synpcc7942_1136	0.90	-1.4
1,160,405	-				+1.0
1,160,423	+				-0.5
1,160,423	+				+0.3
1,160,425	+				+1.0
1,160,425	+				+0.5
1,160,425	+				-1.3
1,160,425	+				+1.0
1,160,425	+				+1.0
1,160,425	+				-1.1
1,160,425	+				-1.0
1,160,425	+				+1.0
1,160,431	-				+1.6
1,160,433	-				-1.3
1,160,433	-				+1.0
1,160,433	-				+1.0
1,160,433	-				+0.8
1,160,433	-				-1.8
1,160,433	-				-1.3
1,160,433	-				-0.4
1,160,433	-				-0.8
1,160,433	-				+0.0
1,160,433	-				-1.1
1,160,433	-				+1.0
1,160,433	-				-0.4
1,160,435	+				+1.0
1,160,443	+				-2.1
1,160,444	-				-1.0
1,160,451	-				+1.6
1,160,453	+				-0.2
1,160,453	+				+2.0
1,160,457	+				+0.7
1,160,526	+				-0.3
1,160,534	-				+0.0
1,160,534	-				+1.2
1,160,652	-				+0.8
1,160,727	+				+1.7
1,160,759	+				+1.5
1,160,776	-				+1.0
1,160,789	+				-1.8
1,160,807	+				-1.0
1,160,849	+	ycf23	Synpcc7942_1137	0.12	+1.0
1,160,933	+	ycf23	Synpcc7942_1137	0.23	+1.0
1,160,945	+	ycf23	Synpcc7942_1137	0.24	+1.0
1,160,981	+	ycf23	Synpcc7942_1137	0.29	-0.5
1,161,012	-	ycf23	Synpcc7942_1137	0.33	+0.0
1,161,013	+	ycf23	Synpcc7942_1137	0.34	+1.0
1,161,023	+	ycf23	Synpcc7942_1137	0.35	+1.0
1,161,062	+	ycf23	Synpcc7942_1137	0.40	+1.0
1,161,132	+	ycf23	Synpcc7942_1137	0.50	+1.0
1,161,140	-	ycf23	Synpcc7942_1137	0.51	+1.0
1,161,140	-	ycf23	Synpcc7942_1137	0.51	+1.0
1,161,140	-	ycf23	Synpcc7942_1137	0.51	-0.5
1,161,171	+	ycf23	Synpcc7942_1137	0.55	+1.0
1,161,188	-	ycf23	Synpcc7942_1137	0.57	+1.0
1,161,190	+	ycf23	Synpcc7942_1137	0.57	+0.0
1,161,253	+	ycf23	Synpcc7942_1137	0.66	+1.0
1,161,284	-	ycf23	Synpcc7942_1137	0.70	+1.0
1,161,284	-	ycf23	Synpcc7942_1137	0.70	+1.0
1,161,374	-	ycf23	Synpcc7942_1137	0.82	+1.0
1,161,483	+				+1.0
1,161,498	+				+1.0
1,161,498	+				+1.0
1,161,506	-				+0.0
1,161,507	-				+1.0
1,161,534	+				+1.0
1,161,565	+				-0.8
1,161,585	-				-1.1
1,161,588	-				-1.5
1,161,603	+				-0.2
1,161,603	+				+0.6
1,161,611	-				-0.9
1,161,611	-				-1.1
1,161,611	-				+0.0
1,161,615	+				-0.4