Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1118

Experiment: Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm Wash/Settlers in WT Conditioned Media in Test Tubes with Spin rep 1
1,134,171	+				+0.0
1,134,171	+				+1.0
1,134,171	+				+2.0
1,134,171	+				-0.6
1,134,179	-				-0.6
1,134,179	-				+0.0
1,134,179	-				-0.1
1,134,257	+				-0.7
1,134,274	+				-1.3
1,134,274	+				-1.1
1,134,282	-				-0.7
1,134,283	-				-1.3
1,134,310	-				+1.0
1,134,405	+				-0.4
1,134,468	+		Synpcc7942_1117	0.13	-1.0
1,134,549	-		Synpcc7942_1117	0.25	-0.3
1,134,564	+		Synpcc7942_1117	0.28	-0.3
1,134,583	+		Synpcc7942_1117	0.30	+1.5
1,134,590	-		Synpcc7942_1117	0.32	-0.7
1,134,594	+		Synpcc7942_1117	0.32	+0.3
1,134,677	+		Synpcc7942_1117	0.45	-0.8
1,134,756	-		Synpcc7942_1117	0.57	+0.2
1,134,815	+		Synpcc7942_1117	0.65	+0.2
1,134,825	-		Synpcc7942_1117	0.67	+0.6
1,134,829	+		Synpcc7942_1117	0.68	+1.3
1,134,829	+		Synpcc7942_1117	0.68	-0.2
1,134,837	-		Synpcc7942_1117	0.69	+1.8
1,134,837	-		Synpcc7942_1117	0.69	-1.8
1,134,837	-		Synpcc7942_1117	0.69	+1.0
1,134,837	-		Synpcc7942_1117	0.69	-1.3
1,134,948	+		Synpcc7942_1117	0.86	-0.1
1,135,130	-				+0.5
1,135,188	+				+1.2
1,135,337	+		Synpcc7942_1118	0.18	-1.1
1,135,345	-		Synpcc7942_1118	0.18	-0.7
1,135,345	-		Synpcc7942_1118	0.18	-1.0
1,135,428	+		Synpcc7942_1118	0.23	+0.0
1,135,542	+		Synpcc7942_1118	0.31	+0.0
1,135,588	-		Synpcc7942_1118	0.34	+1.0
1,135,833	-		Synpcc7942_1118	0.50	+1.6
1,135,869	-		Synpcc7942_1118	0.52	-1.7
1,135,926	-		Synpcc7942_1118	0.56	-1.0
1,135,928	+		Synpcc7942_1118	0.56	-0.2
1,135,974	+		Synpcc7942_1118	0.59	+0.7
1,136,001	+		Synpcc7942_1118	0.60	+1.0
1,136,001	+		Synpcc7942_1118	0.60	-1.3
1,136,009	-		Synpcc7942_1118	0.61	-1.3
1,136,020	-		Synpcc7942_1118	0.62	-3.8
1,136,198	-		Synpcc7942_1118	0.73	-2.0
1,136,203	+		Synpcc7942_1118	0.73	-1.6
1,136,224	+		Synpcc7942_1118	0.75	-0.5
1,136,249	+		Synpcc7942_1118	0.76	-1.8
1,136,249	+		Synpcc7942_1118	0.76	+1.0
1,136,257	-		Synpcc7942_1118	0.77	-0.8
1,136,257	-		Synpcc7942_1118	0.77	-0.9
1,136,257	-		Synpcc7942_1118	0.77	-0.5
1,136,257	-		Synpcc7942_1118	0.77	-2.4
1,136,293	+		Synpcc7942_1118	0.79	-0.5
1,136,309	+		Synpcc7942_1118	0.80	-0.1
1,136,326	+		Synpcc7942_1118	0.81	+0.0
1,136,356	+		Synpcc7942_1118	0.83	-1.8
1,136,435	+		Synpcc7942_1118	0.88	+1.0
1,136,435	+		Synpcc7942_1118	0.88	-0.6
1,136,435	+		Synpcc7942_1118	0.88	-1.0
1,136,435	+		Synpcc7942_1118	0.88	+1.6
1,136,435	+		Synpcc7942_1118	0.88	+0.7
1,136,443	-		Synpcc7942_1118	0.89	+0.3
1,136,443	-		Synpcc7942_1118	0.89	-0.7
1,136,443	-		Synpcc7942_1118	0.89	-0.5
1,136,443	-		Synpcc7942_1118	0.89	-1.4
1,136,443	-		Synpcc7942_1118	0.89	-1.1
1,136,443	-		Synpcc7942_1118	0.89	+0.0
1,136,457	-		Synpcc7942_1118	0.90	-1.8
1,136,514	+				+0.4
1,136,517	-				+1.0
1,136,531	+				-0.4
1,136,534	-				-0.9
1,136,583	-				-1.1
1,136,603	-				+1.0
1,136,617	+				+0.5
1,136,627	+				+1.0
1,136,643	-				-0.8
1,136,666	-				-0.9
1,136,728	+		Synpcc7942_1119	0.16	-0.6
1,136,850	-		Synpcc7942_1119	0.34	+0.0
1,136,864	-		Synpcc7942_1119	0.36	+1.0
1,136,871	-		Synpcc7942_1119	0.37	-0.6
1,136,881	-		Synpcc7942_1119	0.39	-1.0
1,136,915	-		Synpcc7942_1119	0.44	-0.8
1,136,917	-		Synpcc7942_1119	0.44	-1.4
1,136,945	+		Synpcc7942_1119	0.48	+0.9
1,136,953	-		Synpcc7942_1119	0.50	-0.6
1,136,960	-		Synpcc7942_1119	0.51	+1.6
1,137,005	+		Synpcc7942_1119	0.57	-0.4
1,137,013	-		Synpcc7942_1119	0.58	-1.2
1,137,013	-		Synpcc7942_1119	0.58	-1.9
1,137,059	-		Synpcc7942_1119	0.65	-1.0
1,137,059	-		Synpcc7942_1119	0.65	+0.0
1,137,071	+		Synpcc7942_1119	0.67	-2.6
1,137,073	+		Synpcc7942_1119	0.67	-2.2
1,137,129	-		Synpcc7942_1119	0.76	+0.4
1,137,204	+		Synpcc7942_1119	0.87	+1.0
1,137,214	+		Synpcc7942_1119	0.88	+0.4
1,137,264	-				+0.0
1,137,278	+				+1.0
1,137,283	+				-0.1
1,137,299	-				-0.8
1,137,299	-				-0.8
1,137,313	-				+1.9
1,137,328	+				-1.0
1,137,336	-				-0.1
1,137,343	-				-0.0
1,137,383	+				-1.5
1,137,383	+				-0.8
1,137,384	-				+0.5
1,137,391	-				-1.1
1,137,391	-				+1.0
1,137,464	+				+0.0
1,137,464	+				+0.4
1,137,464	+				-1.0
1,137,472	-				-0.6
1,137,499	+				-1.9
1,137,519	-				-1.8
1,137,519	-				+0.0
1,137,519	-				+2.0
1,137,547	+				+1.0
1,137,571	+				+1.0
1,137,599	+				-1.0
1,137,614	-				+0.7
1,137,614	-				-1.6