Experiment: LB in EcoFAB_3.5mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27500 and BWI76_RS27505 are separated by 150 nucleotides BWI76_RS27505 and BWI76_RS27510 are separated by 448 nucleotides
BWI76_RS27500: BWI76_RS27500 - sulfate transporter subunit, at 5,705,614 to 5,706,603
_RS27500
BWI76_RS27505: BWI76_RS27505 - septal ring assembly protein ZapB, at 5,706,754 to 5,706,993
_RS27505
BWI76_RS27510: BWI76_RS27510 - aquaporin, at 5,707,442 to 5,708,293
_RS27510
Position (kb)
5706
5707 Strain fitness (log2 ratio)
-2
-1
0
1 at 5705.755 kb on - strand, within BWI76_RS27500 at 5705.771 kb on - strand, within BWI76_RS27500 at 5705.788 kb on + strand, within BWI76_RS27500 at 5705.812 kb on - strand, within BWI76_RS27500 at 5706.053 kb on + strand, within BWI76_RS27500 at 5706.122 kb on - strand, within BWI76_RS27500 at 5706.273 kb on - strand, within BWI76_RS27500 at 5706.354 kb on + strand, within BWI76_RS27500 at 5706.354 kb on + strand, within BWI76_RS27500 at 5706.361 kb on + strand, within BWI76_RS27500 at 5706.362 kb on - strand, within BWI76_RS27500 at 5706.584 kb on - strand at 5706.585 kb on - strand at 5706.585 kb on - strand at 5706.603 kb on + strand at 5706.624 kb on + strand at 5706.635 kb on + strand at 5706.712 kb on + strand at 5706.717 kb on + strand at 5706.772 kb on + strand at 5706.780 kb on - strand, within BWI76_RS27505 at 5706.810 kb on - strand, within BWI76_RS27505 at 5706.866 kb on - strand, within BWI76_RS27505 at 5706.930 kb on - strand, within BWI76_RS27505 at 5706.989 kb on - strand at 5706.994 kb on + strand at 5706.994 kb on + strand at 5707.012 kb on - strand at 5707.087 kb on - strand at 5707.092 kb on - strand at 5707.534 kb on + strand, within BWI76_RS27510 at 5707.625 kb on - strand, within BWI76_RS27510 at 5707.647 kb on - strand, within BWI76_RS27510 at 5707.656 kb on + strand, within BWI76_RS27510 at 5707.711 kb on - strand, within BWI76_RS27510 at 5707.793 kb on + strand, within BWI76_RS27510
Per-strain Table
Position Strand Gene LocusTag Fraction LB in EcoFAB_3.5mL remove 5,705,755 - BWI76_RS27500 0.14 +0.2 5,705,771 - BWI76_RS27500 0.16 -2.0 5,705,788 + BWI76_RS27500 0.18 -0.3 5,705,812 - BWI76_RS27500 0.20 +0.4 5,706,053 + BWI76_RS27500 0.44 +0.9 5,706,122 - BWI76_RS27500 0.51 -0.1 5,706,273 - BWI76_RS27500 0.67 +0.1 5,706,354 + BWI76_RS27500 0.75 -0.1 5,706,354 + BWI76_RS27500 0.75 +1.1 5,706,361 + BWI76_RS27500 0.75 -0.3 5,706,362 - BWI76_RS27500 0.76 -0.8 5,706,584 - -0.2 5,706,585 - -0.7 5,706,585 - +0.7 5,706,603 + -0.5 5,706,624 + +0.1 5,706,635 + -0.2 5,706,712 + -0.7 5,706,717 + +1.1 5,706,772 + -0.1 5,706,780 - BWI76_RS27505 0.11 -0.2 5,706,810 - BWI76_RS27505 0.23 -1.5 5,706,866 - BWI76_RS27505 0.47 -1.1 5,706,930 - BWI76_RS27505 0.73 -0.6 5,706,989 - -1.4 5,706,994 + -0.9 5,706,994 + -0.6 5,707,012 - -0.4 5,707,087 - -0.2 5,707,092 - +1.5 5,707,534 + BWI76_RS27510 0.11 +0.2 5,707,625 - BWI76_RS27510 0.21 +0.1 5,707,647 - BWI76_RS27510 0.24 -0.4 5,707,656 + BWI76_RS27510 0.25 -0.1 5,707,711 - BWI76_RS27510 0.32 +0.1 5,707,793 + BWI76_RS27510 0.41 -0.5
Or see this region's nucleotide sequence