Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22280

Experiment: LB in EcoFAB_3.5mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS22275 and BWI76_RS22280 are separated by 12 nucleotidesBWI76_RS22280 and BWI76_RS22285 are separated by 134 nucleotides BWI76_RS22275: BWI76_RS22275 - carbamoyltransferase HypF, at 4,642,677 to 4,644,896 _RS22275 BWI76_RS22280: BWI76_RS22280 - formate dehydrogenase-H ferredoxin subunit, at 4,644,909 to 4,645,436 _RS22280 BWI76_RS22285: BWI76_RS22285 - transcriptional regulator, at 4,645,571 to 4,646,584 _RS22285 Position (kb) 4644 4645 4646Strain fitness (log2 ratio) -1 0 1at 4644.032 kb on + strand, within BWI76_RS22275at 4644.147 kb on - strand, within BWI76_RS22275at 4644.471 kb on + strand, within BWI76_RS22275at 4644.491 kb on - strand, within BWI76_RS22275at 4644.506 kb on + strand, within BWI76_RS22275at 4644.569 kb on + strand, within BWI76_RS22275at 4644.889 kb on - strandat 4644.923 kb on - strandat 4644.923 kb on - strandat 4644.961 kb on - strandat 4644.963 kb on + strand, within BWI76_RS22280at 4645.001 kb on + strand, within BWI76_RS22280at 4645.083 kb on - strand, within BWI76_RS22280at 4645.202 kb on + strand, within BWI76_RS22280at 4645.225 kb on + strand, within BWI76_RS22280at 4645.379 kb on + strand, within BWI76_RS22280at 4645.409 kb on - strandat 4645.770 kb on + strand, within BWI76_RS22285at 4645.778 kb on - strand, within BWI76_RS22285at 4645.778 kb on - strand, within BWI76_RS22285at 4645.789 kb on + strand, within BWI76_RS22285at 4646.340 kb on + strand, within BWI76_RS22285at 4646.350 kb on - strand, within BWI76_RS22285at 4646.357 kb on + strand, within BWI76_RS22285

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Per-strain Table

Position Strand Gene LocusTag Fraction LB in EcoFAB_3.5mL
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4,644,032 + BWI76_RS22275 0.61 -0.5
4,644,147 - BWI76_RS22275 0.66 +0.2
4,644,471 + BWI76_RS22275 0.81 +0.5
4,644,491 - BWI76_RS22275 0.82 +1.0
4,644,506 + BWI76_RS22275 0.82 +0.6
4,644,569 + BWI76_RS22275 0.85 -0.4
4,644,889 - -0.8
4,644,923 - +0.2
4,644,923 - -0.5
4,644,961 - -1.0
4,644,963 + BWI76_RS22280 0.10 -1.3
4,645,001 + BWI76_RS22280 0.17 -0.5
4,645,083 - BWI76_RS22280 0.33 -0.3
4,645,202 + BWI76_RS22280 0.55 -1.2
4,645,225 + BWI76_RS22280 0.60 -1.7
4,645,379 + BWI76_RS22280 0.89 -0.3
4,645,409 - +0.2
4,645,770 + BWI76_RS22285 0.20 +0.4
4,645,778 - BWI76_RS22285 0.20 +0.2
4,645,778 - BWI76_RS22285 0.20 -0.2
4,645,789 + BWI76_RS22285 0.21 -0.7
4,646,340 + BWI76_RS22285 0.76 -0.4
4,646,350 - BWI76_RS22285 0.77 +0.3
4,646,357 + BWI76_RS22285 0.78 -0.3

Or see this region's nucleotide sequence