Experiment: LB in EcoFAB_3.5mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07265 and BWI76_RS07270 overlap by 8 nucleotides BWI76_RS07270 and BWI76_RS07275 overlap by 4 nucleotides BWI76_RS07275 and BWI76_RS07280 are separated by 10 nucleotides
BWI76_RS07265: BWI76_RS07265 - ABC transporter ATP-binding protein, at 1,528,943 to 1,529,662
_RS07265
BWI76_RS07270: BWI76_RS07270 - ABC transporter ATP-binding protein, at 1,529,655 to 1,530,422
_RS07270
BWI76_RS07275: BWI76_RS07275 - ABC transporter, at 1,530,419 to 1,531,525
_RS07275
BWI76_RS07280: BWI76_RS07280 - branched-chain amino acid ABC transporter permease, at 1,531,536 to 1,532,486
_RS07280
Position (kb)
1530
1531
1532 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1529.433 kb on - strand, within BWI76_RS07265 at 1529.539 kb on - strand, within BWI76_RS07265 at 1529.596 kb on - strand at 1529.596 kb on - strand at 1529.890 kb on + strand, within BWI76_RS07270 at 1529.923 kb on - strand, within BWI76_RS07270 at 1530.281 kb on + strand, within BWI76_RS07270 at 1530.289 kb on - strand, within BWI76_RS07270 at 1530.341 kb on + strand, within BWI76_RS07270 at 1530.349 kb on - strand at 1530.447 kb on + strand at 1530.487 kb on + strand at 1530.599 kb on + strand, within BWI76_RS07275 at 1530.693 kb on - strand, within BWI76_RS07275 at 1530.693 kb on - strand, within BWI76_RS07275 at 1530.751 kb on - strand, within BWI76_RS07275 at 1530.770 kb on + strand, within BWI76_RS07275 at 1530.826 kb on - strand, within BWI76_RS07275 at 1531.116 kb on - strand, within BWI76_RS07275 at 1531.150 kb on - strand at 1531.195 kb on + strand, within BWI76_RS07275 at 1531.342 kb on + strand, within BWI76_RS07275 at 1531.371 kb on + strand, within BWI76_RS07275 at 1531.371 kb on + strand, within BWI76_RS07275 at 1531.371 kb on + strand, within BWI76_RS07275 at 1531.379 kb on - strand, within BWI76_RS07275 at 1531.620 kb on + strand at 1531.658 kb on - strand, within BWI76_RS07280 at 1531.974 kb on - strand, within BWI76_RS07280 at 1532.024 kb on + strand, within BWI76_RS07280 at 1532.068 kb on - strand, within BWI76_RS07280 at 1532.272 kb on + strand, within BWI76_RS07280 at 1532.340 kb on + strand, within BWI76_RS07280 at 1532.395 kb on + strand at 1532.405 kb on - strand at 1532.405 kb on - strand at 1532.410 kb on + strand at 1532.416 kb on - strand at 1532.418 kb on - strand at 1532.446 kb on + strand at 1532.477 kb on - strand at 1532.501 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB in EcoFAB_3.5mL remove 1,529,433 - BWI76_RS07265 0.68 -1.6 1,529,539 - BWI76_RS07265 0.83 -1.4 1,529,596 - +0.7 1,529,596 - +0.3 1,529,890 + BWI76_RS07270 0.31 -1.2 1,529,923 - BWI76_RS07270 0.35 +0.1 1,530,281 + BWI76_RS07270 0.82 -0.2 1,530,289 - BWI76_RS07270 0.83 +0.2 1,530,341 + BWI76_RS07270 0.89 -0.1 1,530,349 - +0.5 1,530,447 + -0.5 1,530,487 + +0.1 1,530,599 + BWI76_RS07275 0.16 -1.9 1,530,693 - BWI76_RS07275 0.25 +0.9 1,530,693 - BWI76_RS07275 0.25 -0.2 1,530,751 - BWI76_RS07275 0.30 +0.3 1,530,770 + BWI76_RS07275 0.32 +2.2 1,530,826 - BWI76_RS07275 0.37 -0.3 1,531,116 - BWI76_RS07275 0.63 -0.6 1,531,150 - -1.0 1,531,195 + BWI76_RS07275 0.70 -1.2 1,531,342 + BWI76_RS07275 0.83 -0.5 1,531,371 + BWI76_RS07275 0.86 -0.0 1,531,371 + BWI76_RS07275 0.86 -2.0 1,531,371 + BWI76_RS07275 0.86 -0.2 1,531,379 - BWI76_RS07275 0.87 -0.6 1,531,620 + +0.0 1,531,658 - BWI76_RS07280 0.13 +0.4 1,531,974 - BWI76_RS07280 0.46 -0.3 1,532,024 + BWI76_RS07280 0.51 -1.0 1,532,068 - BWI76_RS07280 0.56 -1.5 1,532,272 + BWI76_RS07280 0.77 -2.6 1,532,340 + BWI76_RS07280 0.85 -1.1 1,532,395 + -0.4 1,532,405 - -0.8 1,532,405 - -0.5 1,532,410 + -1.2 1,532,416 - -0.0 1,532,418 - +0.2 1,532,446 + -1.3 1,532,477 - +1.6 1,532,501 - +0.2
Or see this region's nucleotide sequence