Experiment: BHIS with Chlorpromazine 0.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT3920 and BT3921 are separated by 42 nucleotides BT3921 and BT3922 are separated by 25 nucleotides BT3922 and BT3923 are separated by 7 nucleotides BT3923 and BT3924 are separated by 0 nucleotides
BT3920: BT3920 - conserved hypothetical protein (NCBI ptt file), at 5,094,547 to 5,094,876
BT3920
BT3921: BT3921 - hypothetical protein (NCBI ptt file), at 5,094,919 to 5,095,797
BT3921
BT3922: BT3922 - putative ThiJ family intracellular protease/amidase (NCBI ptt file), at 5,095,823 to 5,096,374
BT3922
BT3923: BT3923 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (NCBI ptt file), at 5,096,382 to 5,097,041
BT3923
BT3924: BT3924 - ATP-dependent DNA helicase recG (NCBI ptt file), at 5,097,042 to 5,099,138
BT3924
Position (kb)
5095
5096
5097 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 5094.874 kb on + strand at 5094.883 kb on + strand at 5095.556 kb on + strand, within BT3921 at 5095.585 kb on + strand, within BT3921 at 5095.587 kb on + strand, within BT3921 at 5095.620 kb on + strand, within BT3921 at 5095.620 kb on + strand, within BT3921 at 5095.777 kb on + strand at 5095.777 kb on + strand at 5095.798 kb on + strand at 5095.983 kb on + strand, within BT3922 at 5096.053 kb on + strand, within BT3922 at 5096.257 kb on + strand, within BT3922 at 5096.257 kb on + strand, within BT3922 at 5096.257 kb on + strand, within BT3922 at 5096.287 kb on + strand, within BT3922 at 5096.349 kb on + strand at 5096.843 kb on + strand, within BT3923
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS with Chlorpromazine 0.1 mM remove 5,094,874 + -0.2 5,094,883 + +1.5 5,095,556 + BT3921 0.72 -1.0 5,095,585 + BT3921 0.76 -1.6 5,095,587 + BT3921 0.76 -2.5 5,095,620 + BT3921 0.80 +0.8 5,095,620 + BT3921 0.80 -0.4 5,095,777 + -2.9 5,095,777 + -0.2 5,095,798 + +1.3 5,095,983 + BT3922 0.29 -2.3 5,096,053 + BT3922 0.42 -5.5 5,096,257 + BT3922 0.79 -1.8 5,096,257 + BT3922 0.79 -2.8 5,096,257 + BT3922 0.79 -0.2 5,096,287 + BT3922 0.84 -1.3 5,096,349 + -2.3 5,096,843 + BT3923 0.70 -3.1
Or see this region's nucleotide sequence