Experiment: Bu1_10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06321 and H281DRAFT_06322 are separated by 91 nucleotides H281DRAFT_06322 and H281DRAFT_06323 are separated by 36 nucleotides H281DRAFT_06323 and H281DRAFT_06324 are separated by 272 nucleotides
H281DRAFT_06321: H281DRAFT_06321 - leucyl-tRNA synthetase, at 104,455 to 107,046
_06321
H281DRAFT_06322: H281DRAFT_06322 - LPS-assembly lipoprotein, at 107,138 to 107,692
_06322
H281DRAFT_06323: H281DRAFT_06323 - DNA polymerase III, delta subunit, at 107,729 to 108,853
_06323
H281DRAFT_06324: H281DRAFT_06324 - glutamate-5-semialdehyde dehydrogenase, at 109,126 to 110,397
_06324
Position (kb)
107
108
109 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 107.225 kb on + strand, within H281DRAFT_06322 at 107.438 kb on + strand, within H281DRAFT_06322 at 107.510 kb on + strand, within H281DRAFT_06322 at 107.512 kb on + strand, within H281DRAFT_06322 at 107.522 kb on + strand, within H281DRAFT_06322 at 107.720 kb on + strand at 107.720 kb on + strand at 107.720 kb on + strand at 109.009 kb on + strand at 109.009 kb on + strand at 109.010 kb on - strand at 109.010 kb on - strand at 109.010 kb on - strand at 109.010 kb on - strand at 109.010 kb on - strand at 109.013 kb on + strand at 109.013 kb on + strand at 109.014 kb on - strand at 109.014 kb on - strand at 109.055 kb on + strand at 109.055 kb on + strand at 109.055 kb on + strand at 109.055 kb on + strand at 109.055 kb on + strand at 109.056 kb on - strand at 109.141 kb on + strand at 109.141 kb on + strand at 109.142 kb on - strand at 109.495 kb on + strand, within H281DRAFT_06324 at 109.717 kb on + strand, within H281DRAFT_06324 at 109.717 kb on + strand, within H281DRAFT_06324 at 109.717 kb on + strand, within H281DRAFT_06324 at 109.718 kb on - strand, within H281DRAFT_06324 at 109.718 kb on - strand, within H281DRAFT_06324 at 109.822 kb on + strand, within H281DRAFT_06324 at 109.822 kb on + strand, within H281DRAFT_06324 at 109.823 kb on - strand, within H281DRAFT_06324 at 109.823 kb on - strand, within H281DRAFT_06324
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_10 remove 107,225 + H281DRAFT_06322 0.16 +1.8 107,438 + H281DRAFT_06322 0.54 +3.3 107,510 + H281DRAFT_06322 0.67 +1.8 107,512 + H281DRAFT_06322 0.67 +1.3 107,522 + H281DRAFT_06322 0.69 +2.7 107,720 + +0.5 107,720 + -0.5 107,720 + +1.1 109,009 + +0.3 109,009 + -0.8 109,010 - -0.3 109,010 - -1.8 109,010 - +0.9 109,010 - +1.0 109,010 - -0.5 109,013 + +0.9 109,013 + +1.3 109,014 - +1.2 109,014 - -1.3 109,055 + +0.5 109,055 + -2.0 109,055 + -0.8 109,055 + -0.2 109,055 + +1.3 109,056 - +0.5 109,141 + -1.3 109,141 + -1.8 109,142 - +0.4 109,495 + H281DRAFT_06324 0.29 -0.1 109,717 + H281DRAFT_06324 0.46 +0.5 109,717 + H281DRAFT_06324 0.46 +0.6 109,717 + H281DRAFT_06324 0.46 +0.6 109,718 - H281DRAFT_06324 0.47 -0.4 109,718 - H281DRAFT_06324 0.47 -1.6 109,822 + H281DRAFT_06324 0.55 +0.5 109,822 + H281DRAFT_06324 0.55 -1.8 109,823 - H281DRAFT_06324 0.55 -0.2 109,823 - H281DRAFT_06324 0.55 -1.0
Or see this region's nucleotide sequence