Experiment: Bu1_10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06008 and H281DRAFT_06009 are separated by 269 nucleotides H281DRAFT_06009 and H281DRAFT_06010 are separated by 75 nucleotides H281DRAFT_06010 and H281DRAFT_06011 are separated by 234 nucleotides
H281DRAFT_06008: H281DRAFT_06008 - RNA polymerase, sigma 70 subunit, RpoD, at 8,993 to 11,227
_06008
H281DRAFT_06009: H281DRAFT_06009 - DNA primase, at 11,497 to 13,365
_06009
H281DRAFT_06010: H281DRAFT_06010 - hypothetical protein, at 13,441 to 13,887
_06010
H281DRAFT_06011: H281DRAFT_06011 - SSU ribosomal protein S21P, at 14,122 to 14,334
_06011
Position (kb) 11
12
13
14 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 10.551 kb on + strand, within H281DRAFT_06008 at 10.551 kb on + strand, within H281DRAFT_06008 at 10.551 kb on + strand, within H281DRAFT_06008 at 10.551 kb on + strand at 10.551 kb on + strand, within H281DRAFT_06008 at 10.698 kb on + strand, within H281DRAFT_06008 at 10.699 kb on - strand, within H281DRAFT_06008 at 11.013 kb on - strand at 11.103 kb on - strand at 11.192 kb on + strand at 11.287 kb on + strand at 11.287 kb on + strand at 11.287 kb on + strand at 11.325 kb on - strand at 11.392 kb on + strand at 11.467 kb on - strand at 11.470 kb on - strand at 11.471 kb on + strand at 11.471 kb on + strand at 11.472 kb on - strand at 11.498 kb on + strand at 11.498 kb on + strand at 11.499 kb on - strand at 13.623 kb on - strand, within H281DRAFT_06010 at 13.623 kb on - strand, within H281DRAFT_06010 at 13.623 kb on - strand, within H281DRAFT_06010 at 13.623 kb on - strand, within H281DRAFT_06010 at 13.858 kb on - strand at 13.889 kb on - strand at 13.889 kb on - strand at 13.889 kb on - strand at 14.223 kb on - strand, within H281DRAFT_06011
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_10 remove 10,551 + H281DRAFT_06008 0.70 -1.1 10,551 + H281DRAFT_06008 0.70 -0.7 10,551 + H281DRAFT_06008 0.70 -1.2 10,551 + -0.6 10,551 + H281DRAFT_06008 0.70 -2.5 10,698 + H281DRAFT_06008 0.76 -2.5 10,699 - H281DRAFT_06008 0.76 -3.5 11,013 - -0.1 11,103 - +0.3 11,192 + +0.7 11,287 + -3.5 11,287 + +0.1 11,287 + -4.8 11,325 - +2.0 11,392 + -2.2 11,467 - +0.6 11,470 - +0.2 11,471 + -0.9 11,471 + +0.3 11,472 - +1.5 11,498 + -1.5 11,498 + -0.0 11,499 - -1.6 13,623 - H281DRAFT_06010 0.41 -0.0 13,623 - H281DRAFT_06010 0.41 +2.1 13,623 - H281DRAFT_06010 0.41 +1.6 13,623 - H281DRAFT_06010 0.41 +0.4 13,858 - +0.2 13,889 - -1.2 13,889 - +1.4 13,889 - +0.7 14,223 - H281DRAFT_06011 0.47 +0.3
Or see this region's nucleotide sequence