Experiment: Bu1_10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04587 and H281DRAFT_04588 are separated by 36 nucleotides H281DRAFT_04588 and H281DRAFT_04589 are separated by 2 nucleotides H281DRAFT_04589 and H281DRAFT_04590 are separated by 89 nucleotides
H281DRAFT_04587: H281DRAFT_04587 - hypothetical protein, at 319,504 to 320,631
_04587
H281DRAFT_04588: H281DRAFT_04588 - Acyl dehydratase, at 320,668 to 321,126
_04588
H281DRAFT_04589: H281DRAFT_04589 - Acyl dehydratase, at 321,129 to 321,608
_04589
H281DRAFT_04590: H281DRAFT_04590 - glutathione S-transferase, at 321,698 to 322,399
_04590
Position (kb) 320
321
322 Strain fitness (log2 ratio) -2
-1
0
1 at 319.714 kb on - strand, within H281DRAFT_04587 at 319.763 kb on - strand, within H281DRAFT_04587 at 319.898 kb on - strand, within H281DRAFT_04587 at 319.918 kb on - strand, within H281DRAFT_04587 at 319.959 kb on + strand, within H281DRAFT_04587 at 319.997 kb on - strand, within H281DRAFT_04587 at 319.997 kb on - strand, within H281DRAFT_04587 at 320.192 kb on - strand, within H281DRAFT_04587 at 320.260 kb on + strand, within H281DRAFT_04587 at 320.369 kb on - strand, within H281DRAFT_04587 at 320.369 kb on - strand, within H281DRAFT_04587 at 320.369 kb on - strand, within H281DRAFT_04587 at 320.369 kb on - strand, within H281DRAFT_04587 at 320.438 kb on + strand, within H281DRAFT_04587 at 320.438 kb on + strand, within H281DRAFT_04587 at 320.438 kb on + strand, within H281DRAFT_04587 at 320.439 kb on - strand, within H281DRAFT_04587 at 320.548 kb on - strand at 320.550 kb on + strand at 320.551 kb on - strand at 320.585 kb on + strand at 320.630 kb on - strand at 320.661 kb on + strand at 320.680 kb on + strand at 320.681 kb on - strand at 320.724 kb on + strand, within H281DRAFT_04588 at 320.725 kb on - strand, within H281DRAFT_04588 at 320.845 kb on - strand, within H281DRAFT_04588 at 320.845 kb on - strand, within H281DRAFT_04588 at 320.845 kb on - strand, within H281DRAFT_04588 at 320.845 kb on - strand, within H281DRAFT_04588 at 320.927 kb on + strand, within H281DRAFT_04588 at 320.928 kb on - strand, within H281DRAFT_04588 at 321.073 kb on - strand, within H281DRAFT_04588 at 321.124 kb on + strand at 321.445 kb on + strand, within H281DRAFT_04589 at 321.445 kb on + strand, within H281DRAFT_04589 at 321.526 kb on + strand, within H281DRAFT_04589 at 321.527 kb on - strand, within H281DRAFT_04589 at 321.527 kb on - strand, within H281DRAFT_04589 at 321.527 kb on - strand, within H281DRAFT_04589 at 321.527 kb on - strand, within H281DRAFT_04589 at 321.917 kb on - strand, within H281DRAFT_04590 at 321.917 kb on - strand, within H281DRAFT_04590 at 321.918 kb on + strand, within H281DRAFT_04590 at 321.919 kb on - strand, within H281DRAFT_04590 at 321.994 kb on + strand, within H281DRAFT_04590 at 321.994 kb on + strand at 321.996 kb on + strand, within H281DRAFT_04590 at 322.032 kb on + strand, within H281DRAFT_04590 at 322.032 kb on + strand, within H281DRAFT_04590
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_10 remove 319,714 - H281DRAFT_04587 0.19 -0.3 319,763 - H281DRAFT_04587 0.23 -1.8 319,898 - H281DRAFT_04587 0.35 +0.1 319,918 - H281DRAFT_04587 0.37 +0.2 319,959 + H281DRAFT_04587 0.40 -0.9 319,997 - H281DRAFT_04587 0.44 -0.6 319,997 - H281DRAFT_04587 0.44 -0.1 320,192 - H281DRAFT_04587 0.61 -2.1 320,260 + H281DRAFT_04587 0.67 +0.3 320,369 - H281DRAFT_04587 0.77 +1.6 320,369 - H281DRAFT_04587 0.77 +0.4 320,369 - H281DRAFT_04587 0.77 -0.4 320,369 - H281DRAFT_04587 0.77 -0.6 320,438 + H281DRAFT_04587 0.83 -1.2 320,438 + H281DRAFT_04587 0.83 -0.4 320,438 + H281DRAFT_04587 0.83 -0.4 320,439 - H281DRAFT_04587 0.83 -0.0 320,548 - +0.6 320,550 + -0.7 320,551 - +1.0 320,585 + +0.3 320,630 - -0.6 320,661 + +0.0 320,680 + +0.3 320,681 - -0.9 320,724 + H281DRAFT_04588 0.12 +0.6 320,725 - H281DRAFT_04588 0.12 +0.6 320,845 - H281DRAFT_04588 0.39 -1.8 320,845 - H281DRAFT_04588 0.39 -0.5 320,845 - H281DRAFT_04588 0.39 +0.6 320,845 - H281DRAFT_04588 0.39 +1.0 320,927 + H281DRAFT_04588 0.56 -0.6 320,928 - H281DRAFT_04588 0.57 +0.5 321,073 - H281DRAFT_04588 0.88 -0.8 321,124 + -1.3 321,445 + H281DRAFT_04589 0.66 -0.2 321,445 + H281DRAFT_04589 0.66 +0.1 321,526 + H281DRAFT_04589 0.83 +0.6 321,527 - H281DRAFT_04589 0.83 +0.4 321,527 - H281DRAFT_04589 0.83 -0.1 321,527 - H281DRAFT_04589 0.83 +0.2 321,527 - H281DRAFT_04589 0.83 -1.6 321,917 - H281DRAFT_04590 0.31 -0.5 321,917 - H281DRAFT_04590 0.31 +0.8 321,918 + H281DRAFT_04590 0.31 -0.5 321,919 - H281DRAFT_04590 0.31 -2.3 321,994 + H281DRAFT_04590 0.42 -1.4 321,994 + +0.9 321,996 + H281DRAFT_04590 0.42 -0.0 322,032 + H281DRAFT_04590 0.48 -1.1 322,032 + H281DRAFT_04590 0.48 +1.7
Or see this region's nucleotide sequence