Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_04361

Experiment: Bu1_10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_04360 and H281DRAFT_04361 are separated by 18 nucleotidesH281DRAFT_04361 and H281DRAFT_04362 are separated by 186 nucleotides H281DRAFT_04360: H281DRAFT_04360 - GTP-binding protein LepA, at 76,362 to 78,155 _04360 H281DRAFT_04361: H281DRAFT_04361 - signal peptidase I Serine peptidase. MEROPS family S26A, at 78,174 to 79,067 _04361 H281DRAFT_04362: H281DRAFT_04362 - RNAse III (EC 3.1.26.3), at 79,254 to 80,624 _04362 Position (kb) 78 79 80Strain fitness (log2 ratio) -2 -1 0 1at 77.586 kb on + strand, within H281DRAFT_04360at 77.586 kb on + strand, within H281DRAFT_04360at 77.586 kb on + strand, within H281DRAFT_04360at 77.601 kb on + strand, within H281DRAFT_04360at 77.661 kb on + strandat 77.661 kb on + strand, within H281DRAFT_04360at 77.966 kb on + strand, within H281DRAFT_04360at 77.999 kb on + strandat 79.162 kb on + strandat 79.166 kb on + strandat 79.166 kb on + strandat 79.166 kb on + strandat 79.166 kb on + strandat 79.166 kb on + strandat 79.166 kb on + strandat 79.167 kb on - strandat 79.176 kb on + strandat 79.242 kb on + strandat 79.242 kb on + strandat 79.242 kb on + strandat 79.243 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bu1_10
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77,586 + H281DRAFT_04360 0.68 -1.6
77,586 + H281DRAFT_04360 0.68 +0.9
77,586 + H281DRAFT_04360 0.68 -0.8
77,601 + H281DRAFT_04360 0.69 +1.2
77,661 + -1.1
77,661 + H281DRAFT_04360 0.72 -1.3
77,966 + H281DRAFT_04360 0.89 -0.6
77,999 + +0.5
79,162 + -1.7
79,166 + -1.5
79,166 + -1.3
79,166 + -1.2
79,166 + -0.2
79,166 + +0.2
79,166 + -2.5
79,167 - +0.9
79,176 + -2.2
79,242 + +0.5
79,242 + -0.6
79,242 + -1.6
79,243 - -0.6

Or see this region's nucleotide sequence