Experiment: Bu1_10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03512 and H281DRAFT_03513 are separated by 153 nucleotides H281DRAFT_03513 and H281DRAFT_03514 are separated by 40 nucleotides H281DRAFT_03514 and H281DRAFT_03515 are separated by 216 nucleotides
H281DRAFT_03512: H281DRAFT_03512 - Cu+-exporting ATPase, at 9,877 to 12,234
_03512
H281DRAFT_03513: H281DRAFT_03513 - methyl-accepting chemotaxis sensory transducer, at 12,388 to 14,361
_03513
H281DRAFT_03514: H281DRAFT_03514 - glutathione S-transferase, at 14,402 to 15,055
_03514
H281DRAFT_03515: H281DRAFT_03515 - polyhydroxyalkanoate depolymerase, intracellular, at 15,272 to 16,735
_03515
Position (kb) 12
13
14
15 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 11.466 kb on + strand, within H281DRAFT_03512 at 11.466 kb on + strand, within H281DRAFT_03512 at 11.466 kb on + strand, within H281DRAFT_03512 at 11.467 kb on - strand, within H281DRAFT_03512 at 12.045 kb on + strand at 12.100 kb on + strand at 12.265 kb on - strand at 12.265 kb on - strand at 12.265 kb on - strand at 12.313 kb on - strand at 12.372 kb on + strand at 12.373 kb on - strand at 12.646 kb on + strand, within H281DRAFT_03513 at 12.646 kb on + strand, within H281DRAFT_03513 at 12.647 kb on - strand, within H281DRAFT_03513 at 12.647 kb on - strand, within H281DRAFT_03513 at 12.678 kb on - strand, within H281DRAFT_03513 at 12.819 kb on + strand, within H281DRAFT_03513 at 12.913 kb on + strand, within H281DRAFT_03513 at 13.084 kb on + strand, within H281DRAFT_03513 at 13.085 kb on - strand, within H281DRAFT_03513 at 13.085 kb on - strand, within H281DRAFT_03513 at 13.220 kb on - strand, within H281DRAFT_03513 at 13.335 kb on - strand, within H281DRAFT_03513 at 13.373 kb on + strand, within H281DRAFT_03513 at 13.921 kb on - strand, within H281DRAFT_03513 at 13.921 kb on - strand, within H281DRAFT_03513 at 14.000 kb on + strand, within H281DRAFT_03513 at 14.499 kb on + strand, within H281DRAFT_03514 at 14.532 kb on + strand, within H281DRAFT_03514 at 14.532 kb on + strand, within H281DRAFT_03514 at 14.533 kb on - strand, within H281DRAFT_03514 at 14.562 kb on + strand, within H281DRAFT_03514 at 14.562 kb on + strand, within H281DRAFT_03514 at 14.563 kb on - strand, within H281DRAFT_03514 at 14.563 kb on - strand, within H281DRAFT_03514 at 14.563 kb on - strand, within H281DRAFT_03514 at 14.563 kb on - strand, within H281DRAFT_03514 at 14.563 kb on - strand, within H281DRAFT_03514 at 14.610 kb on + strand, within H281DRAFT_03514 at 14.611 kb on - strand, within H281DRAFT_03514 at 14.635 kb on + strand, within H281DRAFT_03514 at 14.801 kb on + strand, within H281DRAFT_03514 at 14.804 kb on + strand, within H281DRAFT_03514 at 14.805 kb on - strand, within H281DRAFT_03514 at 14.832 kb on + strand, within H281DRAFT_03514 at 14.833 kb on - strand, within H281DRAFT_03514 at 15.018 kb on + strand at 15.046 kb on + strand at 15.047 kb on - strand at 15.056 kb on - strand at 15.060 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_10 remove 11,466 + H281DRAFT_03512 0.67 -2.2 11,466 + H281DRAFT_03512 0.67 -2.0 11,466 + H281DRAFT_03512 0.67 -0.8 11,467 - H281DRAFT_03512 0.67 -0.1 12,045 + +0.1 12,100 + -0.6 12,265 - -0.0 12,265 - -2.0 12,265 - +0.5 12,313 - -3.0 12,372 + +0.9 12,373 - -0.3 12,646 + H281DRAFT_03513 0.13 -2.5 12,646 + H281DRAFT_03513 0.13 -0.3 12,647 - H281DRAFT_03513 0.13 +1.0 12,647 - H281DRAFT_03513 0.13 +0.2 12,678 - H281DRAFT_03513 0.15 -2.0 12,819 + H281DRAFT_03513 0.22 +0.4 12,913 + H281DRAFT_03513 0.27 +0.2 13,084 + H281DRAFT_03513 0.35 +0.1 13,085 - H281DRAFT_03513 0.35 +0.8 13,085 - H281DRAFT_03513 0.35 -2.2 13,220 - H281DRAFT_03513 0.42 +0.2 13,335 - H281DRAFT_03513 0.48 +0.5 13,373 + H281DRAFT_03513 0.50 -1.8 13,921 - H281DRAFT_03513 0.78 +1.4 13,921 - H281DRAFT_03513 0.78 +3.5 14,000 + H281DRAFT_03513 0.82 -3.3 14,499 + H281DRAFT_03514 0.15 +0.4 14,532 + H281DRAFT_03514 0.20 +0.8 14,532 + H281DRAFT_03514 0.20 +0.3 14,533 - H281DRAFT_03514 0.20 -0.7 14,562 + H281DRAFT_03514 0.24 +0.5 14,562 + H281DRAFT_03514 0.24 +0.3 14,563 - H281DRAFT_03514 0.25 +1.2 14,563 - H281DRAFT_03514 0.25 -0.1 14,563 - H281DRAFT_03514 0.25 -0.0 14,563 - H281DRAFT_03514 0.25 +0.5 14,563 - H281DRAFT_03514 0.25 -1.0 14,610 + H281DRAFT_03514 0.32 -0.1 14,611 - H281DRAFT_03514 0.32 -2.7 14,635 + H281DRAFT_03514 0.36 +0.4 14,801 + H281DRAFT_03514 0.61 -2.1 14,804 + H281DRAFT_03514 0.61 -0.3 14,805 - H281DRAFT_03514 0.62 +0.3 14,832 + H281DRAFT_03514 0.66 +0.8 14,833 - H281DRAFT_03514 0.66 +0.3 15,018 + -0.5 15,046 + -2.1 15,047 - +0.9 15,056 - -0.2 15,060 - +2.5
Or see this region's nucleotide sequence