Experiment: Bu1_10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03473 and H281DRAFT_03474 are separated by 289 nucleotides H281DRAFT_03474 and H281DRAFT_03475 are separated by 5 nucleotides H281DRAFT_03475 and H281DRAFT_03476 are separated by 140 nucleotides H281DRAFT_03476 and H281DRAFT_03477 are separated by 319 nucleotides
H281DRAFT_03473: H281DRAFT_03473 - hypothetical protein, at 557,169 to 557,528
_03473
H281DRAFT_03474: H281DRAFT_03474 - hypothetical protein, at 557,818 to 557,964
_03474
H281DRAFT_03475: H281DRAFT_03475 - hypothetical protein, at 557,970 to 558,236
_03475
H281DRAFT_03476: H281DRAFT_03476 - NAD+ synthase, at 558,377 to 559,237
_03476
H281DRAFT_03477: H281DRAFT_03477 - hypothetical protein, at 559,557 to 560,510
_03477
Position (kb) 558
559
560 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 557.398 kb on + strand, within H281DRAFT_03473 at 557.399 kb on - strand, within H281DRAFT_03473 at 557.571 kb on - strand at 557.703 kb on + strand at 557.704 kb on - strand at 557.704 kb on - strand at 557.830 kb on + strand at 557.830 kb on + strand at 557.830 kb on + strand at 557.831 kb on - strand at 557.831 kb on - strand at 557.831 kb on - strand at 557.949 kb on + strand, within H281DRAFT_03474 at 557.950 kb on - strand at 558.051 kb on + strand, within H281DRAFT_03475 at 558.206 kb on - strand, within H281DRAFT_03475 at 558.281 kb on - strand at 558.714 kb on - strand, within H281DRAFT_03476 at 558.775 kb on - strand, within H281DRAFT_03476 at 558.805 kb on + strand, within H281DRAFT_03476 at 558.805 kb on + strand, within H281DRAFT_03476 at 558.928 kb on + strand, within H281DRAFT_03476 at 559.060 kb on + strand, within H281DRAFT_03476 at 559.095 kb on + strand, within H281DRAFT_03476 at 559.095 kb on + strand, within H281DRAFT_03476 at 559.096 kb on - strand, within H281DRAFT_03476 at 559.123 kb on - strand, within H281DRAFT_03476 at 559.307 kb on - strand at 559.351 kb on + strand at 559.352 kb on - strand at 559.395 kb on + strand at 559.398 kb on + strand at 559.398 kb on + strand at 559.399 kb on - strand at 559.453 kb on + strand at 559.610 kb on + strand at 559.611 kb on - strand at 559.804 kb on + strand, within H281DRAFT_03477 at 559.804 kb on + strand, within H281DRAFT_03477 at 559.804 kb on + strand, within H281DRAFT_03477 at 559.888 kb on - strand, within H281DRAFT_03477 at 559.888 kb on - strand, within H281DRAFT_03477 at 559.935 kb on + strand, within H281DRAFT_03477 at 560.011 kb on - strand, within H281DRAFT_03477 at 560.011 kb on - strand, within H281DRAFT_03477
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_10 remove 557,398 + H281DRAFT_03473 0.64 -0.6 557,399 - H281DRAFT_03473 0.64 +0.3 557,571 - +1.8 557,703 + +0.1 557,704 - +1.1 557,704 - +0.3 557,830 + +0.2 557,830 + +0.9 557,830 + -0.3 557,831 - +0.6 557,831 - +1.4 557,831 - +1.1 557,949 + H281DRAFT_03474 0.89 -0.0 557,950 - +0.2 558,051 + H281DRAFT_03475 0.30 -0.1 558,206 - H281DRAFT_03475 0.88 -2.3 558,281 - -0.7 558,714 - H281DRAFT_03476 0.39 +0.9 558,775 - H281DRAFT_03476 0.46 +0.0 558,805 + H281DRAFT_03476 0.50 +2.2 558,805 + H281DRAFT_03476 0.50 -0.3 558,928 + H281DRAFT_03476 0.64 +0.1 559,060 + H281DRAFT_03476 0.79 -0.3 559,095 + H281DRAFT_03476 0.83 -2.9 559,095 + H281DRAFT_03476 0.83 +1.1 559,096 - H281DRAFT_03476 0.84 +1.2 559,123 - H281DRAFT_03476 0.87 +0.1 559,307 - -0.5 559,351 + -2.0 559,352 - -0.1 559,395 + -0.1 559,398 + -0.3 559,398 + +0.4 559,399 - +1.9 559,453 + -0.7 559,610 + -0.8 559,611 - -1.2 559,804 + H281DRAFT_03477 0.26 -0.1 559,804 + H281DRAFT_03477 0.26 +1.1 559,804 + H281DRAFT_03477 0.26 -0.2 559,888 - H281DRAFT_03477 0.35 +1.0 559,888 - H281DRAFT_03477 0.35 -1.1 559,935 + H281DRAFT_03477 0.40 +0.1 560,011 - H281DRAFT_03477 0.48 -1.2 560,011 - H281DRAFT_03477 0.48 +0.3
Or see this region's nucleotide sequence