Experiment: Bu1_10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02901 and H281DRAFT_02902 overlap by 4 nucleotides H281DRAFT_02902 and H281DRAFT_02903 are separated by 57 nucleotides H281DRAFT_02903 and H281DRAFT_02904 overlap by 14 nucleotides
H281DRAFT_02901: H281DRAFT_02901 - DNA excision repair protein ERCC-2, at 507,491 to 509,755
_02901
H281DRAFT_02902: H281DRAFT_02902 - VRR-NUC domain-containing protein, at 509,752 to 511,575
_02902
H281DRAFT_02903: H281DRAFT_02903 - L-lactate dehydrogenase complex protein LldG, at 511,633 to 512,220
_02903
H281DRAFT_02904: H281DRAFT_02904 - L-lactate dehydrogenase complex protein LldF, at 512,207 to 513,598
_02904
Position (kb) 509
510
511
512 Strain fitness (log2 ratio) -2
-1
0
1 at 508.875 kb on + strand, within H281DRAFT_02901 at 508.876 kb on - strand, within H281DRAFT_02901 at 509.153 kb on - strand, within H281DRAFT_02901 at 509.355 kb on - strand, within H281DRAFT_02901 at 509.509 kb on - strand, within H281DRAFT_02901 at 509.748 kb on + strand at 509.886 kb on - strand at 509.890 kb on + strand at 510.224 kb on + strand, within H281DRAFT_02902 at 510.398 kb on + strand, within H281DRAFT_02902 at 510.398 kb on + strand, within H281DRAFT_02902 at 510.445 kb on - strand, within H281DRAFT_02902 at 510.619 kb on + strand, within H281DRAFT_02902 at 510.952 kb on + strand, within H281DRAFT_02902 at 511.157 kb on - strand, within H281DRAFT_02902 at 511.157 kb on - strand, within H281DRAFT_02902 at 511.294 kb on + strand, within H281DRAFT_02902 at 511.529 kb on + strand at 511.532 kb on + strand at 511.533 kb on - strand at 511.602 kb on - strand at 511.839 kb on - strand, within H281DRAFT_02903 at 512.302 kb on + strand at 512.303 kb on - strand at 512.303 kb on - strand at 512.473 kb on + strand, within H281DRAFT_02904 at 512.474 kb on - strand, within H281DRAFT_02904 at 512.476 kb on - strand, within H281DRAFT_02904
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_10 remove 508,875 + H281DRAFT_02901 0.61 -0.1 508,876 - H281DRAFT_02901 0.61 -1.3 509,153 - H281DRAFT_02901 0.73 -0.4 509,355 - H281DRAFT_02901 0.82 +0.3 509,509 - H281DRAFT_02901 0.89 -0.1 509,748 + -0.0 509,886 - -0.3 509,890 + +0.4 510,224 + H281DRAFT_02902 0.26 -0.7 510,398 + H281DRAFT_02902 0.35 -1.2 510,398 + H281DRAFT_02902 0.35 +1.5 510,445 - H281DRAFT_02902 0.38 +0.9 510,619 + H281DRAFT_02902 0.48 -0.1 510,952 + H281DRAFT_02902 0.66 -0.7 511,157 - H281DRAFT_02902 0.77 +0.2 511,157 - H281DRAFT_02902 0.77 +0.1 511,294 + H281DRAFT_02902 0.85 -0.1 511,529 + +0.2 511,532 + -0.3 511,533 - -2.2 511,602 - +1.4 511,839 - H281DRAFT_02903 0.35 +0.2 512,302 + +0.4 512,303 - +0.9 512,303 - -0.4 512,473 + H281DRAFT_02904 0.19 -0.8 512,474 - H281DRAFT_02904 0.19 -0.4 512,476 - H281DRAFT_02904 0.19 +0.9
Or see this region's nucleotide sequence