Experiment: Bu1_10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02469 and H281DRAFT_02470 are separated by 54 nucleotides H281DRAFT_02470 and H281DRAFT_02471 are separated by 33 nucleotides H281DRAFT_02471 and H281DRAFT_02472 are separated by 2 nucleotides
H281DRAFT_02469: H281DRAFT_02469 - membrane dipeptidase, at 38,642 to 39,613
_02469
H281DRAFT_02470: H281DRAFT_02470 - Predicted hydrocarbon binding protein, contains 4VR domain, at 39,668 to 40,204
_02470
H281DRAFT_02471: H281DRAFT_02471 - 2,4-dienoyl-CoA reductase, at 40,238 to 42,301
_02471
H281DRAFT_02472: H281DRAFT_02472 - Fe-S oxidoreductase, at 42,304 to 44,217
_02472
Position (kb) 40
41
42
43 Strain fitness (log2 ratio) -1
0
1
2 at 39.628 kb on + strand at 39.629 kb on - strand at 39.686 kb on - strand at 39.773 kb on - strand, within H281DRAFT_02470 at 39.807 kb on - strand, within H281DRAFT_02470 at 39.833 kb on + strand, within H281DRAFT_02470 at 39.835 kb on + strand, within H281DRAFT_02470 at 39.836 kb on - strand, within H281DRAFT_02470 at 40.047 kb on - strand, within H281DRAFT_02470 at 40.047 kb on - strand, within H281DRAFT_02470 at 40.203 kb on - strand at 40.267 kb on + strand at 40.268 kb on - strand at 40.358 kb on + strand at 40.360 kb on + strand at 40.474 kb on + strand, within H281DRAFT_02471 at 41.294 kb on + strand, within H281DRAFT_02471 at 41.295 kb on - strand, within H281DRAFT_02471 at 41.636 kb on - strand, within H281DRAFT_02471 at 41.902 kb on - strand, within H281DRAFT_02471 at 41.939 kb on + strand, within H281DRAFT_02471 at 41.988 kb on - strand, within H281DRAFT_02471 at 42.155 kb on - strand at 42.422 kb on - strand at 42.422 kb on - strand at 42.566 kb on - strand, within H281DRAFT_02472
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_10 remove 39,628 + -0.1 39,629 - +1.3 39,686 - +1.1 39,773 - H281DRAFT_02470 0.20 +1.0 39,807 - H281DRAFT_02470 0.26 -0.4 39,833 + H281DRAFT_02470 0.31 -0.8 39,835 + H281DRAFT_02470 0.31 -0.2 39,836 - H281DRAFT_02470 0.31 +0.8 40,047 - H281DRAFT_02470 0.71 +0.1 40,047 - H281DRAFT_02470 0.71 -0.2 40,203 - -0.7 40,267 + +0.2 40,268 - +0.3 40,358 + +0.0 40,360 + -1.1 40,474 + H281DRAFT_02471 0.11 +2.1 41,294 + H281DRAFT_02471 0.51 +0.1 41,295 - H281DRAFT_02471 0.51 -0.8 41,636 - H281DRAFT_02471 0.68 +0.4 41,902 - H281DRAFT_02471 0.81 +0.8 41,939 + H281DRAFT_02471 0.82 -0.6 41,988 - H281DRAFT_02471 0.85 +0.2 42,155 - -0.6 42,422 - -0.7 42,422 - -0.6 42,566 - H281DRAFT_02472 0.14 -0.8
Or see this region's nucleotide sequence