Experiment: Bu1_10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02461 and H281DRAFT_02462 are separated by 93 nucleotides H281DRAFT_02462 and H281DRAFT_02463 are separated by 180 nucleotides
H281DRAFT_02461: H281DRAFT_02461 - MFS transporter, putative metabolite:H+ symporter, at 27,510 to 29,027
_02461
H281DRAFT_02462: H281DRAFT_02462 - beta-lactamase class C, at 29,121 to 30,302
_02462
H281DRAFT_02463: H281DRAFT_02463 - choline dehydrogenase, at 30,483 to 32,168
_02463
Position (kb) 29
30
31 Strain fitness (log2 ratio) -2
-1
0
1
2 at 28.379 kb on - strand, within H281DRAFT_02461 at 28.392 kb on + strand, within H281DRAFT_02461 at 28.393 kb on - strand, within H281DRAFT_02461 at 28.450 kb on - strand, within H281DRAFT_02461 at 28.518 kb on + strand, within H281DRAFT_02461 at 28.639 kb on - strand, within H281DRAFT_02461 at 28.740 kb on + strand, within H281DRAFT_02461 at 28.740 kb on + strand, within H281DRAFT_02461 at 28.740 kb on + strand, within H281DRAFT_02461 at 28.741 kb on - strand, within H281DRAFT_02461 at 28.746 kb on + strand, within H281DRAFT_02461 at 28.747 kb on - strand, within H281DRAFT_02461 at 28.836 kb on + strand, within H281DRAFT_02461 at 28.837 kb on - strand, within H281DRAFT_02461 at 28.837 kb on - strand, within H281DRAFT_02461 at 28.930 kb on + strand at 29.122 kb on + strand at 29.245 kb on + strand, within H281DRAFT_02462 at 29.399 kb on - strand, within H281DRAFT_02462 at 29.555 kb on - strand, within H281DRAFT_02462 at 29.610 kb on - strand, within H281DRAFT_02462 at 29.610 kb on - strand, within H281DRAFT_02462 at 29.610 kb on - strand, within H281DRAFT_02462 at 29.654 kb on + strand, within H281DRAFT_02462 at 29.656 kb on + strand, within H281DRAFT_02462 at 29.656 kb on + strand, within H281DRAFT_02462 at 29.656 kb on + strand, within H281DRAFT_02462 at 29.656 kb on + strand, within H281DRAFT_02462 at 29.656 kb on + strand, within H281DRAFT_02462 at 29.657 kb on - strand, within H281DRAFT_02462 at 29.771 kb on - strand, within H281DRAFT_02462 at 29.795 kb on - strand, within H281DRAFT_02462 at 29.818 kb on + strand, within H281DRAFT_02462 at 29.944 kb on + strand, within H281DRAFT_02462 at 29.945 kb on - strand, within H281DRAFT_02462 at 29.945 kb on - strand, within H281DRAFT_02462 at 30.076 kb on - strand, within H281DRAFT_02462 at 30.099 kb on + strand, within H281DRAFT_02462 at 30.099 kb on + strand, within H281DRAFT_02462 at 30.103 kb on + strand, within H281DRAFT_02462 at 30.103 kb on + strand, within H281DRAFT_02462 at 30.103 kb on + strand, within H281DRAFT_02462 at 30.103 kb on + strand, within H281DRAFT_02462 at 30.104 kb on - strand, within H281DRAFT_02462 at 30.152 kb on - strand, within H281DRAFT_02462 at 30.152 kb on - strand, within H281DRAFT_02462 at 30.279 kb on + strand at 30.279 kb on + strand at 30.294 kb on + strand at 30.295 kb on - strand at 30.303 kb on - strand at 30.535 kb on + strand at 30.536 kb on - strand at 30.925 kb on + strand, within H281DRAFT_02463 at 31.054 kb on + strand, within H281DRAFT_02463 at 31.055 kb on - strand, within H281DRAFT_02463 at 31.222 kb on + strand, within H281DRAFT_02463 at 31.223 kb on - strand, within H281DRAFT_02463 at 31.258 kb on + strand, within H281DRAFT_02463 at 31.259 kb on - strand, within H281DRAFT_02463 at 31.259 kb on - strand, within H281DRAFT_02463 at 31.259 kb on - strand, within H281DRAFT_02463
Per-strain Table
Position Strand Gene LocusTag Fraction Bu1_10 remove 28,379 - H281DRAFT_02461 0.57 -0.2 28,392 + H281DRAFT_02461 0.58 -1.9 28,393 - H281DRAFT_02461 0.58 -0.1 28,450 - H281DRAFT_02461 0.62 -1.9 28,518 + H281DRAFT_02461 0.66 +1.4 28,639 - H281DRAFT_02461 0.74 +0.6 28,740 + H281DRAFT_02461 0.81 +0.2 28,740 + H281DRAFT_02461 0.81 -2.1 28,740 + H281DRAFT_02461 0.81 -1.0 28,741 - H281DRAFT_02461 0.81 +0.2 28,746 + H281DRAFT_02461 0.81 +0.3 28,747 - H281DRAFT_02461 0.81 -1.2 28,836 + H281DRAFT_02461 0.87 -0.1 28,837 - H281DRAFT_02461 0.87 -0.6 28,837 - H281DRAFT_02461 0.87 +0.0 28,930 + +0.6 29,122 + -0.9 29,245 + H281DRAFT_02462 0.10 +1.4 29,399 - H281DRAFT_02462 0.24 -1.2 29,555 - H281DRAFT_02462 0.37 -0.9 29,610 - H281DRAFT_02462 0.41 -0.2 29,610 - H281DRAFT_02462 0.41 +0.5 29,610 - H281DRAFT_02462 0.41 +1.0 29,654 + H281DRAFT_02462 0.45 +1.4 29,656 + H281DRAFT_02462 0.45 +1.4 29,656 + H281DRAFT_02462 0.45 -1.1 29,656 + H281DRAFT_02462 0.45 -1.1 29,656 + H281DRAFT_02462 0.45 -0.4 29,656 + H281DRAFT_02462 0.45 +0.9 29,657 - H281DRAFT_02462 0.45 +0.2 29,771 - H281DRAFT_02462 0.55 +2.2 29,795 - H281DRAFT_02462 0.57 +1.3 29,818 + H281DRAFT_02462 0.59 -0.3 29,944 + H281DRAFT_02462 0.70 -1.1 29,945 - H281DRAFT_02462 0.70 -1.5 29,945 - H281DRAFT_02462 0.70 +0.9 30,076 - H281DRAFT_02462 0.81 -0.2 30,099 + H281DRAFT_02462 0.83 +1.3 30,099 + H281DRAFT_02462 0.83 -0.8 30,103 + H281DRAFT_02462 0.83 +0.5 30,103 + H281DRAFT_02462 0.83 +0.3 30,103 + H281DRAFT_02462 0.83 +0.8 30,103 + H281DRAFT_02462 0.83 +0.0 30,104 - H281DRAFT_02462 0.83 +1.0 30,152 - H281DRAFT_02462 0.87 -0.9 30,152 - H281DRAFT_02462 0.87 -0.2 30,279 + -0.1 30,279 + +1.3 30,294 + -1.6 30,295 - -0.6 30,303 - +0.5 30,535 + +0.8 30,536 - -1.4 30,925 + H281DRAFT_02463 0.26 +1.0 31,054 + H281DRAFT_02463 0.34 -0.3 31,055 - H281DRAFT_02463 0.34 -0.5 31,222 + H281DRAFT_02463 0.44 -0.2 31,223 - H281DRAFT_02463 0.44 -0.9 31,258 + H281DRAFT_02463 0.46 -0.6 31,259 - H281DRAFT_02463 0.46 +0.1 31,259 - H281DRAFT_02463 0.46 +0.5 31,259 - H281DRAFT_02463 0.46 +2.5
Or see this region's nucleotide sequence